RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
BNIP3-202ENST00000540159 CCDC32Q9BV29 185 aa12.76□□□□□ -0.37
BNIP3-202ENST00000540159 SLC17A9Q9BYT1 436 aa12.76□□□□□ -0.37
BNIP3-202ENST00000540159 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
BNIP3-202ENST00000540159 MAT2BQ9NZL9 334 aa12.76□□□□□ -0.37
BNIP3-202ENST00000540159 H2AFY2Q9P0M6 372 aaPredicted RBP12.76□□□□□ -0.37
BNIP3-202ENST00000540159 ACSL5Q9ULC5 683 aa12.76□□□□□ -0.37
BNIP3-202ENST00000540159 TP53BP1Q12888 1972 aaPredicted RBP12.76□□□□□ -0.37
BNIP3-202ENST00000540159 TRAV27A0A087WT01 109 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 LOC105369274A0A096LPK9 316 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 EMC8O43402 210 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PKLRP30613 574 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SLC9A3P48764 834 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SNRPD2P62316 118 aaKnown RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 TRAM2Q15035 370 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 OR4N4Q8N0Y3 316 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 Q8N402 240 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 OR10H4Q8NGA5 316 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 DIO2Q92813 273 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 DEPDC7Q96QD5 511 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SPATA5L1Q9BVQ7 753 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 HDAC8Q9BY41 377 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 C3orf14Q9HBI5 128 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 B3GAT2Q9NPZ5 323 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PTGFRNQ9P2B2 879 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PROM1O43490 865 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 RASGRP1O95267 797 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SLC2A2P11168 524 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 OMPP47874 163 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PPM1FP49593 454 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ST3GAL3Q11203 375 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 DEFB110Q30KQ9 67 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 GXYLT1Q4G148 440 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 CCDC92Q53HC0 331 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ZNF57Q68EA5 555 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ARL9Q6T311 187 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 WDR88Q6ZMY6 472 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 VN1R4Q7Z5H5 301 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ST6GAL2Q96JF0 529 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 TMEM168Q9H0V1 697 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SNX7Q9UNH6 387 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SIRT4Q9Y6E7 314 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 C12orf71A8MTZ7 269 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PLA2G10O15496 165 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 CTSVO60911 334 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PAHP00439 452 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SAGP10523 405 aaPredicted RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ACVR1BP36896 505 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 ETV6P41212 452 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 SLC3A1Q07837 685 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 COX10Q12887 443 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PUS10Q3MIT2 529 aaKnown RBP12.75□□□□□ -0.37
BNIP3-202ENST00000540159 PLK5Q496M5 336 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 KLHL22Q53GT1 634 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 AMIGO1Q86WK6 493 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 OR13C5Q8NGS8 318 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 TMEM246Q9BRR3 403 aa12.75□□□□□ -0.37
BNIP3-202ENST00000540159 A0A0G2JPF8 293 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 CENPXA8MT69 81 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 HNRNPCL2B2RXH8 293 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 HNRNPCL3B7ZW38 293 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 H3BSH0 61 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 GABRPO00591 440 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 LINC01565O15544 149 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 RNGTTO60942 597 aaKnown RBP12.74□□□□□ -0.37
BNIP3-202ENST00000540159 HNRNPCL4P0DMR1 293 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 MYL9P24844 172 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 PBX2P40425 430 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 INPP1P49441 399 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 OR10A3P58181 314 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 TRIQKQ629K1 86 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 BHLHB9Q6PI77 547 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 SENP5Q96HI0 755 aaPredicted RBP12.74□□□□□ -0.37
BNIP3-202ENST00000540159 PINK1Q9BXM7 581 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 NDEL1Q9GZM8 345 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 PPIL3Q9H2H8 161 aaKnown RBP12.74□□□□□ -0.37
BNIP3-202ENST00000540159 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 NDOR1Q9UHB4 597 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 CES1P1Q9UKY3 287 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 C2orf16Q68DN1 1984 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 DOCK8Q8NF50 2099 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 NOS3P29474 1203 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 PPP1CAP62136 330 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.74□□□□□ -0.373e-7■■□□□ 12.2
BNIP3-202ENST00000540159 TSPAN31Q12999 210 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.74□□□□□ -0.371e-7■■□□□ 11.5
BNIP3-202ENST00000540159 SNAP47Q5SQN1 464 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 FRRS1Q6ZNA5 592 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 OR56A1Q8NGH5 318 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 OR2L8Q8NGY9 312 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 GNPDA2Q8TDQ7 276 aa12.74□□□□□ -0.37
BNIP3-202ENST00000540159 SRMSQ9H3Y6 488 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms