RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 A0A1W2PQ67 120 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 FOXE1O00358 373 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PCDH17O14917 1159 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TNFSF14O43557 240 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TPPPO94811 219 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 AP2A2O94973 939 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PRAMEF1O95521 474 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 RAB36O95755 333 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 DHFRP00374 187 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 GASTP01350 101 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 IFNA7P01567 189 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 RAF1P04049 648 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 IFNW1P05000 195 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 HBQ1P09105 142 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 C1SP09871 688 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 OR56A5P0C7T3 313 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 NR2F6P10588 404 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PSKH1P11801 424 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 NID1P14543 1247 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 ARSBP15848 533 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 IL32P24001 234 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 GABRA5P31644 462 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 SPAM1P38567 509 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 ETV3P41162 512 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 GRK6P43250 576 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 MAN2A2P49641 1150 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TPMTP51580 245 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 ATP12AP54707 1039 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 WNT4P56705 351 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 CDK6Q00534 326 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PIN1Q13526 163 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PDE7AQ13946 482 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 MFSD13AQ14CX5 517 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 HEPACAMQ14CZ8 416 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 WSCD2Q2TBF2 565 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 HLA-BQ31612 363 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 BTBD16Q32M84 506 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 KLHL12Q53G59 568 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 ZMAT1Q5H9K5 638 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TEX261Q6UWH6 196 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 KIAA1324Q6UXG2 1013 aaKnown RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 CASP12Q6UXS9 341 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 QSOX2Q6ZRP7 698 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 UBE2R2Q712K3 238 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TMPRSS12Q86WS5 348 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 SLC38A6Q8IZM9 456 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 SLC34A3Q8N130 599 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 Q8N402 240 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 DEFB119Q8N690 84 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 LRRC17Q8N6Y2 441 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 AQP11Q8NBQ7 271 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 HJURPQ8NCD3 748 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TOR1AIP2Q8NFQ8 470 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 NLGN4YQ8NFZ3 816 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 OR4M1Q8NGD0 313 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 OR2I1PQ8NGU4 316 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 UBASH3BQ8TF42 649 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 FGF11Q92914 225 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 MTFMTQ96DP5 389 aaKnown RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 CLIP3Q96DZ5 547 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 ZBED6CLQ96FA7 236 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 SIPA1Q96FS4 1042 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PDXPQ96GD0 296 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 OR2M2Q96R28 347 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 C17orf62Q9BQA9 187 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 C7orf50Q9BRJ6 194 aaKnown RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 KATNB1Q9BVA0 655 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 JAM3Q9BX67 310 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 TSSK6Q9BXA6 273 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 SPNS1Q9H2V7 528 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 REEP4Q9H6H4 257 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 GAREM1Q9H706 876 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 NMNAT1Q9HAN9 279 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-204ENST00000539847 FSCN3Q9NQT6 498 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PRDM8Q9NQV8 689 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 IL20Q9NYY1 176 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 COPZ2Q9P299 210 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 GULP1Q9UBP9 304 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 LHX3Q9UBR4 397 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 CBLCQ9ULV8 474 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 SNX11Q9Y5W9 270 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 PRSS21Q9Y6M0 314 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 U3KQ87 197 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF462Q96JM2 2506 aa7.18□□□□□ -1.26
CCDC60-204ENST00000539847 GLYATL1P3A0A0U1RQE8 302 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 TRBC2A0A5B9 178 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 MGAT4DA6NG13 374 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 PRAMEF25A6NGN4 478 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 WASHC1A8K0Z3 465 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 A8MV72 311 aaPredicted RBP7.17□□□□□ -1.26
CCDC60-204ENST00000539847 QSOX1O00391 747 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 CASC3O15234 703 aaKnown RBP7.17□□□□□ -1.26
CCDC60-204ENST00000539847 YY2O15391 372 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 SGTAO43765 313 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 PCDH7O60245 1069 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 OR7A10O76100 309 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 CD160O95971 181 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 HLA-DPB1P04440 258 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 ADRA2AP08913 450 aa7.17□□□□□ -1.26
CCDC60-204ENST00000539847 ANXA4P09525 319 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms