RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 SATB2Q9UPW6 733 aa18.84■□□□□ 0.61
PACSIN3-211ENST00000539589 A0A0A6YYC8 382 aaPredicted RBP18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 CPED1A4D0V7 1026 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 I3L1I5 382 aaPredicted RBP18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 SLC15A1P46059 708 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 EIPR1Q53HC9 387 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 PLEKHM3Q6ZWE6 761 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 FAM181AQ8N9Y4 354 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 LGALS12Q96DT0 336 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 GPA33Q99795 319 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 ZNF350Q9GZX5 532 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 MAT2BQ9NZL9 334 aa18.83■□□□□ 0.61
PACSIN3-211ENST00000539589 AGAP5A6NIR3 686 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 A8MU76 341 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 STX11O75558 287 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 PTHP01270 115 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 THBS1P07996 1170 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 TRHRP34981 398 aaPredicted RBP18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 GIPRP48546 466 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 BMXP51813 675 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 SKP1P63208 163 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 LSM11P83369 360 aaKnown RBP eCLIP18.83■□□□□ 0.62e-6■□□□□ 9.2
PACSIN3-211ENST00000539589 GINS1Q14691 196 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 DGUOKQ16854 277 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 DCST2Q5T1A1 773 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 WDR74Q6RFH5 385 aaPredicted RBP18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ZNF574Q6ZN55 896 aaPredicted RBP18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ZNF367Q7RTV3 350 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 SLCO6A1Q86UG4 719 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ZBTB46Q86UZ6 589 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ZNF619Q8N2I2 560 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 TCEANCQ8N8B7 351 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 COX18Q8N8Q8 333 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 DOK4Q8TEW6 326 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ANKRD9Q96BM1 317 aaPredicted RBP18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 MCHR1Q99705 422 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 TVP23BQ9NYZ1 205 aa18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ATXN7L1Q9ULK2 861 aaPredicted RBP18.83■□□□□ 0.6
PACSIN3-211ENST00000539589 ASCC3Q8N3C0 2202 aaKnown RBP18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 HYKKA2RU49 373 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 EFCAB9A8MZ26 197 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 YKT6O15498 198 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 CHST10O43529 356 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 SLC35E2P0CK97 266 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 PNLIPP16233 465 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 SERPINB10P48595 397 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 NCS1P62166 190 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 MGAT2Q10469 447 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 GPR68Q15743 365 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 OCLNQ16625 522 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 CCNJQ5T5M9 372 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 MEDAGQ5VYS4 303 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 ZNF836Q6ZNA1 936 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 IQCF1Q8N6M8 205 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 PIGXQ8TBF5 258 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 POLDIP3Q9BY77 421 aaKnown RBP18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 DNAJC27Q9NZQ0 273 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 GMEB2Q9UKD1 530 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 RPL36Q9Y3U8 105 aaKnown RBP18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 FER1L5A0AVI2 2057 aa18.82■□□□□ 0.6
PACSIN3-211ENST00000539589 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 A0A1W2PQM1 296 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 OR5F1O95221 314 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 AK1P00568 194 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 PCYT1AP49585 367 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 CLK1P49759 484 aaKnown RBP18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 SMSP52788 366 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 MLLT10P55197 1068 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 HSD11B2P80365 405 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 DECR1Q16698 335 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 LINC00299Q6ZSB3 139 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 RABEPKQ7Z6M1 372 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 CARFQ8N187 725 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 FAM26EQ8N5C1 309 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 TOR1AIP2Q8NFQ8 470 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 GPR151Q8TDV0 419 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 RPL3LQ92901 407 aaKnown RBP18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 CTHRC1Q96CG8 243 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 SAP130Q9H0E3 1048 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 TBC1D23Q9NUY8 699 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 TMEM184BQ9Y519 407 aaPredicted RBP18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 FITM1A5D6W6 292 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 AIREO43918 545 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 OR10H2O60403 315 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 DBIP07108 87 aaKnown RBP18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 EEF1A1P68104 462 aaKnown RBP18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 HOXC5Q00444 222 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 CDK5Q00535 292 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 TSPAN31Q12999 210 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 EXOSC7Q15024 291 aaKnown RBP18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 ARMCX4Q5H9R4 360 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 SLC25A30Q5SVS4 291 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 MFSD4BQ5TF39 518 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 TCEAL6Q6IPX3 200 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 PRICKLE2Q7Z3G6 844 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 SLC46A3Q7Z3Q1 461 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 PRSS42Q7Z5A4 293 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 D2HGDHQ8N465 521 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 TEX47Q8TBZ9 253 aa18.81■□□□□ 0.6
PACSIN3-211ENST00000539589 ACOT11Q8WXI4 607 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms