RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 C17orf105B2RV13 164 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 IL1RNP18510 177 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 P2RY2P41231 377 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 RNF144AP50876 292 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 POLR2HP52434 150 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 EMP2P54851 167 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 RPP30P78346 268 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF169Q14929 603 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 AMIGO3Q86WK7 504 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CNTN4Q8IWV2 1026 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 GALNT6Q8NCL4 622 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR4K5Q8NGD3 323 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR51T1Q8NGJ9 327 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR5L1Q8NGL2 311 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR5D14Q8NGL3 314 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR13J1Q8NGT2 312 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PPP1R35Q8TAP8 253 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 FOXRED1Q96CU9 486 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR5B12Q96R08 314 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR5B2Q96R09 309 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SOX17Q9H6I2 414 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CDH20Q9HBT6 801 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ARNT2Q9HBZ2 717 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ERVK13-1Q9NX77 482 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF337Q9Y3M9 751 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 C17orf113A0A1B0GUU1 675 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 MC3RP41968 323 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 METTL11BQ5VVY1 283 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 DNAJC22Q8N4W6 341 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SPIN2AQ99865 258 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SPIN2BQ9BPZ2 258 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 DHRS4L1P0CG22 281 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CD34P28906 385 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 AHRP35869 848 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PRLHRP49683 370 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 C18orf21Q32NC0 220 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 RPS26P11Q5JNZ5 115 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 GPR139Q6DWJ6 353 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 LIPIQ6XZB0 460 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 HMGN2P46Q86SG4 172 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 NRMQ8IXM6 262 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 LSM14AQ8ND56 463 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR9A2Q8NGT5 310 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 HYLS1Q96M11 299 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR10A5Q9H207 317 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR10A2Q9H208 303 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ABCG5Q9H222 651 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 POLE4Q9NR33 117 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PRSS38A1L453 326 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SLC2A5P22732 501 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 HSD17B7P56937 341 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 YPEL5P62699 121 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CSNK2A1P68400 391 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 GLO1Q04760 184 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 RAB41Q5JT25 222 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 IER5LQ5T953 404 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF551Q7Z340 670 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 KIAA0907Q7Z7F0 614 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 GPR148Q8TDV2 347 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ABHD5Q8WTS1 349 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 MSANTD3Q96H12 275 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 SLC39A1Q9NY26 324 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 USP3Q9Y6I4 520 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 NAP1L6A6NFF2 107 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 NOTOA8MTQ0 251 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF701M0R085 212 aaPredicted RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 PTTG1O95997 202 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM225BP0DP42 221 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CD40LGP29965 261 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 CPOXP36551 454 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 LBX1P52954 281 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 LSAMPQ13449 338 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 EIF2B1Q14232 305 aaKnown RBP6.12□□□□□ -1.43
LSAMP-207ENST00000539563 FAM69AQ5T7M9 428 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 RCBTB1Q8NDN9 531 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 OR52E1Q8NGJ3 308 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 NEIL2Q969S2 332 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 MOCOSQ96EN8 888 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 DHRS4Q9BTZ2 278 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 ANKRD60Q9BZ19 345 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 TREX1Q9NSU2 369 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 GPR83Q9NYM4 423 aa6.12□□□□□ -1.43
LSAMP-207ENST00000539563 A0A1W2PQL4 384 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 KIAA0355O15063 1070 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ACTL6BO94805 426 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 RPS17P08708 135 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CERS1P27544 350 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 MSX1P28360 303 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PRSS3P35030 304 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 DCAF7P61962 342 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 PM20D2Q8IYS1 436 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 KDM1BQ8NB78 822 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 CLEC1AQ8NC01 280 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 DNAJA3Q96EY1 480 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF578Q96N58 590 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF443Q9Y2A4 671 aaPredicted RBP6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GPR45Q9Y5Y3 372 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms