RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ZNF781Q8N8C0 355 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 COX18Q8N8Q8 333 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 RELL2Q8NC24 303 aaPredicted RBP10.48□□□□□ -0.73
RTN3-209ENST00000538995 SLC16A11Q8NCK7 471 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 FAM110BQ8TC76 370 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 SFXN5Q8TD22 340 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 PIK3R3Q92569 461 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 SLC9A6Q92581 669 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 WNT2BQ93097 391 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 MOAP1Q96BY2 351 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 C1GALT1C1Q96EU7 318 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 TM9SF2Q99805 663 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 TUBA1CQ9BQE3 449 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 G6PC3Q9BUM1 346 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 ACBD3Q9H3P7 528 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 FLRT3Q9NZU0 649 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 CLCF1Q9UBD9 225 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 L3MBTL1Q9Y468 752 aa10.48□□□□□ -0.73
RTN3-209ENST00000538995 INTS1Q8N201 2190 aaKnown RBP10.48□□□□□ -0.73
RTN3-209ENST00000538995 WDR91A4D1P6 747 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 KDM4EB2RXH2 506 aaPredicted RBP10.47□□□□□ -0.73
RTN3-209ENST00000538995 SYT5O00445 386 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 HCRTR2O43614 444 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 KCNK2O95069 426 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 ANGPTL1O95841 491 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 IGKV1D-16P01601 117 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 G6PDP11413 515 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 PEPDP12955 493 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 TBXA2RP21731 343 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 RPL14P50914 215 aaKnown RBP10.47□□□□□ -0.73
RTN3-209ENST00000538995 SLC18A1P54219 525 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 DIO3P55073 304 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 CLDN8P56748 225 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 EEF1A1P68104 462 aaKnown RBP10.47□□□□□ -0.73
RTN3-209ENST00000538995 STX5Q13190 355 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 STX3Q13277 289 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 MPP2Q14168 576 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 DUSP5Q16690 384 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 GRAMD1BQ3KR37 738 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 EEF1A1P5Q5VTE0 462 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 RAET1LQ5VY80 246 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 BHLHB9Q6PI77 547 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 POMZP3Q6PJE2 187 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 LURAP1LQ8IV03 231 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 MISPQ8IVT2 679 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 KRTCAP2Q8N6L1 136 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 FBXO30Q8TB52 745 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 JADE3Q92613 823 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 RNASE6Q93091 150 aaKnown RBP10.47□□□□□ -0.73
RTN3-209ENST00000538995 SORT1Q99523 831 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 SH3GL2Q99962 352 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 PIGQQ9BRB3 760 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 SFXN3Q9BWM7 321 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 BTBD2Q9BX70 525 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 RTN4RQ9BZR6 473 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 DSN1Q9H410 356 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 KCNK9Q9NPC2 374 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 RPH3AQ9Y2J0 694 aaPredicted RBP10.47□□□□□ -0.73
RTN3-209ENST00000538995 SNX8Q9Y5X2 465 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 CCDC168Q8NDH2 2452 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 CSMD2Q7Z408 3487 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 PDZD2O15018 2839 aa10.47□□□□□ -0.73
RTN3-209ENST00000538995 A0A087WZY1 265 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 A0A1W2PQD3 144 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 CLCA1A8K7I4 914 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 C17orf51A8MQB3 221 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 RCBTB2O95199 551 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 OXSR1O95747 527 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 C6orf47O95873 294 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 HMGN2P05204 90 aaKnown RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 TMIGD3P0DMS9 266 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 ZNF17P17021 662 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 HK1P19367 917 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 POU3F2P20265 443 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 EFNA1P20827 205 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 BGNP21810 368 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 CCT3P49368 545 aaKnown RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 DGKQP52824 942 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 DLX5P56178 289 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 WNT3P56703 355 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 EEFSECP57772 596 aaKnown RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 POU6F2P78424 691 aaPredicted RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 OCRLQ01968 901 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 SRYQ05066 204 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 LASP1Q14847 261 aaKnown RBP10.46□□□□□ -0.73
RTN3-209ENST00000538995 SPDYE7PQ495Y7 208 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 HHATQ5VTY9 493 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 CDC73Q6P1J9 531 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 ARSKQ6UWY0 536 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 MEIOBQ8N635 442 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 C9orf106Q8NAJ2 232 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 OR8J2Q8NGG1 315 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 DUSP19Q8WTR2 217 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 ZNF559Q9BR84 538 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 DUSP26Q9BV47 211 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 ACTRT3Q9BYD9 372 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 C20orf27Q9GZN8 174 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 PIGUQ9H490 435 aa10.46□□□□□ -0.73
RTN3-209ENST00000538995 CXorf36Q9H7Y0 433 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms