RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 RPS25P62851 125 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 CDK6Q00534 326 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SEMG2Q02383 582 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ACSM2AQ08AH3 577 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 IHHQ14623 411 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HLXQ14774 488 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 SF1Q15637 639 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 ST3GAL2Q16842 350 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HFEQ30201 348 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CDNFQ49AH0 187 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 FAM76BQ5HYJ3 339 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 GPRC6AQ5T6X5 926 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HENMT1Q5T8I9 393 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 HES5Q5TA89 166 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ACSM2BQ68CK6 577 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ZNF772Q68DY9 489 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 PTRHD1Q6GMV3 140 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 DHRS7BQ6IAN0 325 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 ADNP2Q6IQ32 1131 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 REEP3Q6NUK4 255 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HIST3H2AQ7L7L0 130 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 GPRIN1Q7Z2K8 1008 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SLC9B2Q86UD5 537 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ANKRD46Q86W74 232 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 MARCH9Q86YJ5 346 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SPAG16Q8N0X2 631 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SVBPQ8N300 66 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ZBTB2Q8N680 514 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TCEANCQ8N8B7 351 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 OR9Q2Q8NGE9 314 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HUS1BQ8NHY5 278 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 BAHD1Q8TBE0 780 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 SLC22A8Q8TCC7 542 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 HAVCR2Q8TDQ0 301 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SMAP2Q8WU79 429 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 APOBEC4Q8WW27 367 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TCEAL3Q969E4 200 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 PSMG2Q969U7 264 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ESAMQ96AP7 390 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 MRPS24Q96EL2 167 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 SIPA1Q96FS4 1042 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SENP5Q96HI0 755 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ZNF582Q96NG8 517 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 PKMYT1Q99640 499 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TCF25Q9BQ70 676 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 FUZQ9BT04 418 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 RSPH9Q9H1X1 276 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 FBXO44Q9H4M3 255 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 DDX31Q9H8H2 851 aaKnown RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 PDFQ9HBH1 243 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ZNF334Q9HCZ1 680 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 GPATCH2Q9NW75 528 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 SPATA6Q9NWH7 488 aaPredicted RBP6.28□□□□□ -1.4
USP28-207ENST00000538475 ELOVL2Q9NXB9 296 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 DCAF16Q9NXF7 216 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TAS2R5Q9NYW4 299 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 VPS29Q9UBQ0 182 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 MAFFQ9ULX9 164 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 ST3GAL5Q9UNP4 418 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TMEM5Q9Y2B1 443 aa6.28□□□□□ -1.4
USP28-207ENST00000538475 TRAV6A0A075B6T7 132 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TRAV1-2A0A0B4J238 106 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TRBV5-4A0A0C4DH59 114 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 A0A0G2JPF8 293 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 A0A0U1RQF3 1178 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TRBC2A0A5B9 178 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 MYBPHLA2RUH7 354 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ANKRD66B4E2M5 251 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 HNRNPCL3B7ZW38 293 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 H0YIV9 168 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ZNF593O00488 134 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 WNT10BO00744 389 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 SSX5O60225 188 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ACSL4O60488 711 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 GREM1O60565 184 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TBX19O60806 448 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 PRAMEF2O60811 474 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 RDH16O75452 317 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TRBC1P01850 177 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TFP02787 698 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 VTNP04004 478 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 CD1AP06126 327 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 LPLP06858 475 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ASGR2P07307 311 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 C1SP09871 688 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 LIMS3P0CW19 117 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 LIMS4P0CW20 117 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 HNRNPCL4P0DMR1 293 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TXNP10599 105 aaKnown RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 HAPLN1P10915 354 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 MGMTP16455 207 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 CR2P20023 1033 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 IDSP22304 550 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 NNMTP40261 264 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 CCR9P51686 369 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 MVDP53602 400 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TBX4P57082 545 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms