RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TAPT1Q6NXT6 567 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM71Q6P5X7 295 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TSEN54Q7Z6J9 526 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 FAM26EQ8N5C1 309 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RASGEF1AQ8N9B8 481 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 BOLLQ8N9W6 283 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GPRC5AQ8NFJ5 357 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RAB24Q969Q5 203 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 HIST1H2BAQ96A08 127 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 VOPP1Q96AW1 172 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 CDKN2AIPNLQ96HQ2 116 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TEFMQ96QE5 360 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TAAR1Q96RJ0 339 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PBX4Q9BYU1 374 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TM6SF2Q9BZW4 377 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 DUSP15Q9H1R2 295 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 OPN3Q9H1Y3 402 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RHBGQ9H310 441 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 NOX3Q9HBY0 568 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TREM1Q9NP99 234 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 FAM50BQ9Y247 325 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 KCTD3Q9Y597 815 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 DSPPQ9NZW4 1301 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SHISA3A0PJX4 238 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2W5A6NFC9 320 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GFYI3L273 518 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF197O14709 1029 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PGRMC2O15173 223 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 MBTPS2O43462 519 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SMAD6O43541 496 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GSTZ1O43708 216 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RDH16O75452 317 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 REM1O75628 298 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ANXA2P07355 339 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 IDSP22304 550 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PPIBP23284 216 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 KIR3DL1P43629 444 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 CCR9P51686 369 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 DGCR2P98153 550 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 HMGCS1Q01581 520 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 TCP10Q12799 353 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GTF2H2Q13888 395 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 BOP1Q14137 746 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PCBP2Q15366 365 aaKnown RBP eCLIP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 OR52W1Q6IF63 320 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GTF2H2CQ6P1K8 395 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ABHD13Q7L211 337 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RTL10Q7L3V2 364 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2W3Q7Z3T1 314 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 OR1J4Q8NGS1 313 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GPBAR1Q8TDU6 330 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 DPH2Q9BQC3 489 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PIGQQ9BRB3 760 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PDCD2LQ9BRP1 358 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 NTMT1Q9BV86 223 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 COA1Q9GZY4 146 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SARS2Q9NP81 518 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 FGF20Q9NP95 211 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PIGVQ9NUD9 493 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ACER3Q9NUN7 267 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ASF1BQ9NVP2 202 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GAR1Q9NY12 217 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 FLRT1Q9NZU1 646 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ZMYM5Q9UJ78 669 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 A0A1B0GVC2 190 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 A6NIN4 97 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 HEPACAM2A8MVW5 462 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 MATN3O15232 486 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 B4GALT5O43286 388 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 C1GALT1C1LP0DN25 315 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 CELP19835 753 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ACHEP22303 614 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PBLDP30039 288 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 FEN1P39748 380 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 CEACAM6P40199 344 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RAD52P43351 418 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 LHX1P48742 406 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ART1P52961 327 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 HTRA4P83105 476 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SP4Q02446 784 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 BCL2L1Q07817 233 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 MPPE1Q53F39 396 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 RNASE12Q5GAN4 147 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC25A30Q5SVS4 291 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PAPD4Q6PIY7 484 aaKnown RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PRSS55Q6UWB4 352 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 ABHD15Q6UXT9 468 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 NHLRC1Q6VVB1 395 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 NPSR1Q6W5P4 371 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 GOLGA7Q7Z5G4 137 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PRR18Q8N4B5 295 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 WNT2BQ93097 391 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PINK1Q9BXM7 581 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 IPPKQ9H8X2 491 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 NMNAT1Q9HAN9 279 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 MYOZ1Q9NP98 299 aaPredicted RBP8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 CTPS2Q9NRF8 586 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 UQCC1Q9NVA1 299 aa8.01□□□□□ -1.13
SRGAP1-202ENST00000537556 PARPBPQ9NWS1 579 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms