RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 GPR55Q9Y2T6 319 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 PCDHGA3Q9Y5H0 932 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 CDHR4A6H8M9 788 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 MYL12BO14950 172 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 AQP9O43315 295 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 KLF4O43474 513 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 OCM2P0CE71 109 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 OCMP0CE72 109 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 NR4A1P22736 598 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SOX6P35712 828 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 NCS1P62166 190 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ZNF155Q12901 538 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 FOXD4Q12950 439 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 MLLT11Q13015 90 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SPHARQ15513 63 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 GPR68Q15743 365 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 MINDY4Q4G0A6 757 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SYT14P1Q58G82 188 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 DCDC5Q6ZRR9 648 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 MED25Q71SY5 747 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 OLIG3Q7RTU3 272 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 PRSS41Q7RTY9 318 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 CMIPQ8IY22 773 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SPEM1Q8N4L4 309 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 NANOGP1Q8N7R0 232 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 OR5T3Q8NGG3 340 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 OR6Q1Q8NGQ2 317 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 OR9A4Q8NGU2 314 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 LRR1Q96L50 414 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 G6PC3Q9BUM1 346 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 TPSD1Q9BZJ3 242 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 FAM60AQ9NP50 221 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 PDE7BQ9NP56 450 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 FGF20Q9NP95 211 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 AKIP1Q9NQ31 210 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 DNAJC27Q9NZQ0 273 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 CA14Q9ULX7 337 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 EXOSC1Q9Y3B2 195 aaKnown RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 CDH10Q9Y6N8 788 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 FANCMQ8IYD8 2048 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SYNDIG1LA6NDD5 238 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 PRKYO43930 277 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 PRAMEF2O60811 474 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 GADD45AP24522 165 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 GABRA3P34903 492 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 TRHRP34981 398 aaPredicted RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 SOX18P35713 384 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 MAZP56270 477 aaKnown RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 RPS3AP61247 264 aaKnown RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 SLC13A2Q13183 592 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 GRM7Q14831 915 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 ZNF404Q494X3 552 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 PRICKLE2Q7Z3G6 844 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 SLC15A4Q8N697 577 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 TMCO5AQ8N6Q1 288 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 TMEM52Q8NDY8 209 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 RLN3Q8WXF3 142 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 RIT1Q92963 219 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 ZNF582Q96NG8 517 aaPredicted RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 SLIRPQ9GZT3 109 aaKnown RBP12.62□□□□□ -0.39
SMG6-203ENST00000536871 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
SMG6-203ENST00000536871 TMEM129A0AVI4 362 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 FITM1A5D6W6 292 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 KDM4EB2RXH2 506 aaPredicted RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 TAF4O00268 1085 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 DNAJB6O75190 326 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 CBX7O95931 251 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 WNT1P04628 370 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 OPRL1P41146 370 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 ZNF136P52737 540 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 LIMK1P53667 647 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 NXPH1P58417 271 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 COPZ1P61923 177 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 ID2Q02363 134 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 FZD5Q13467 585 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 GAS6Q14393 721 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 C14orf28Q4W4Y0 310 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 ARMC4Q5T2S8 1044 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 MRPL2Q5T653 305 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 ZNF620Q6ZNG0 422 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 ZNF761Q86XN6 746 aaPredicted RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 SLC34A3Q8N130 599 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 OR52R1Q8NGF1 315 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 BRIX1Q8TDN6 353 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 FGF11Q92914 225 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 HLA-CQ95604 372 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 MVB12AQ96EY5 273 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 FAM46AQ96IP4 442 aaKnown RBP12.61□□□□□ -0.39
SMG6-203ENST00000536871 DGAT2Q96PD7 388 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 NEURL2Q9BR09 285 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
SMG6-203ENST00000536871 TAPBPLQ9BX59 468 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms