RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 OR1J4Q8NGS1 313 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 TBL1XR1Q9BZK7 514 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 PAIP1Q9H074 479 aaKnown RBP12.37□□□□□ -0.43
RPAIN-205ENST00000536255 SERHL2Q9H4I8 314 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 PROK2Q9HC23 129 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 UBQLN4Q9NRR5 601 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 QPCTLQ9NXS2 382 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 CORO2BQ9UQ03 480 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 WIF1Q9Y5W5 379 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
RPAIN-205ENST00000536255 A0A1B0GTH9 108 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 EVPLLA8MZ36 301 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 CLIC1O00299 241 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 SCDO00767 359 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 ZNHIT1O43257 154 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 STX11O75558 287 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 IGKV1D-16P01601 117 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 GUSBP08236 651 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 TBXA2RP21731 343 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 PTPN6P29350 595 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 CRATP43155 626 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 MAGEA5P43359 124 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 CASP9P55211 416 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 FADDQ13158 208 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 STX5Q13190 355 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 C3AR1Q16581 482 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 ARHGAP11BQ3KRB8 267 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 GTDC1Q4AE62 458 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 COQ5Q5HYK3 327 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 PAGE3Q5JUK9 113 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 CCNJQ5T5M9 372 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 TIGD3Q6B0B8 471 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 ARHGAP11AQ6P4F7 1023 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 DHDDSQ86SQ9 333 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 FAM109AQ8N4B1 249 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 PNPT1Q8TCS8 783 aaKnown RBP12.36□□□□□ -0.43
RPAIN-205ENST00000536255 RNF138Q8WVD3 245 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 SDF2Q99470 211 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 DEFB127Q9H1M4 99 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 GALNT9Q9HCQ5 603 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 POLE3Q9NRF9 147 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 SLC6A13Q9NSD5 602 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 PPP4R1LQ9P1A2 415 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.36□□□□□ -0.43
RPAIN-205ENST00000536255 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 ADAM21Q9UKJ8 722 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 KCNE3Q9Y6H6 103 aa12.36□□□□□ -0.43
RPAIN-205ENST00000536255 SPTAN1Q13813 2472 aaKnown RBP12.36□□□□□ -0.43
RPAIN-205ENST00000536255 LRRC3CA6NJW4 275 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ALG1L2C9J202 215 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 HMGN4O00479 90 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 CCL21O00585 134 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 SNPHO15079 494 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 SCO2O43819 266 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 FADS1O60427 444 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ZG16O60844 167 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 PDE9AO76083 593 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ENDOUP21128 410 aaKnown RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 GDF1P27539 372 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 PTGS2P35354 604 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 PTGDSP41222 190 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 NFYCQ13952 458 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 CYLC2Q14093 348 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 GNA13Q14344 377 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 SLC10A1Q14973 349 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 FLYWCH1Q4VC44 716 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 HEPHL1Q6MZM0 1159 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 MTFR2Q6P444 385 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 PIGWQ7Z7B1 504 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 GALNT10Q86SR1 603 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 MTDHQ86UE4 582 aaKnown RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 MISPQ8IVT2 679 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 PCYOX1LQ8NBM8 494 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 RP9Q8TA86 221 aaKnown RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 RAB8BQ92930 207 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 NTNG2Q96CW9 530 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 TRNT1Q96Q11 434 aaKnown RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ZNF350Q9GZX5 532 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ARMCX1Q9P291 453 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 P2RX2Q9UBL9 471 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 SUCOQ9UBS9 1254 aaKnown RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
RPAIN-205ENST00000536255 ARL2BPQ9Y2Y0 163 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 EXPH5Q8NEV8 1989 aa12.35□□□□□ -0.43
RPAIN-205ENST00000536255 A0A1W2PQD3 144 aa12.34□□□□□ -0.43
RPAIN-205ENST00000536255 A1L4Q6 167 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms