RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 XAB2Q9HCS7 855 aaKnown RBP7.28□□□□□ -1.24
CLIP1-206ENST00000535290 ESM1Q9NQ30 184 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 MGAT4BQ9UQ53 548 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 FKBP7Q9Y680 259 aa7.28□□□□□ -1.24
CLIP1-206ENST00000535290 PCNX3Q9H6A9 2034 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FADS1O60427 444 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 CCNT2O60583 730 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 STAMBPO95630 424 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 MBD3O95983 291 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TACSTD2P09758 323 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 CTAGE8P0CG41 777 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PCSK2P16519 638 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PTAFRP25105 342 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 IL12BP29460 328 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 SERPINB1P30740 379 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 RBMXP38159 391 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PIK3CBP42338 1070 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 CHN2P52757 468 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PNLIPRP2P54317 469 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 MRPS35P82673 323 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FOXL1Q12952 345 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 ACAP2Q15057 778 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 LTB4RQ15722 352 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TEDDM1Q5T9Z0 273 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 GTF2IRD2BQ6EKJ0 949 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FAM45BPQ6NSW5 357 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 CAVIN1Q6NZI2 390 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FAM180BQ6P0A1 224 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 Q6ZT83 130 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 GALNT7Q86SF2 657 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TBC1D1Q86TI0 1168 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 MARCH3Q86UD3 253 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 GTF2IRD2Q86UP8 949 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TDRPQ86YL5 185 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 WDR75Q8IWA0 830 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 CTAGE4Q8IX94 777 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 SYCE1Q8N0S2 351 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TCAIMQ8N3R3 496 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 NKAPQ8N5F7 415 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 ZDHHC22Q8N966 263 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 NUP43Q8NFH3 380 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 UHMK1Q8TAS1 419 aaKnown RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FAM45AQ8TCE6 357 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 RNF128Q8TEB7 428 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FBF1Q8TES7 1133 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 MTBPQ96DY7 904 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 FBXO17Q96EF6 278 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 GBP4Q96PP9 640 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TRMOQ9BU70 441 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 TMEM185BQ9H7F4 350 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PAQR5Q9NXK6 330 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-206ENST00000535290 KLHL13Q9P2N7 655 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PRODH2Q9UF12 536 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 PRSS50Q9UI38 385 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 VDAC3Q9Y277 283 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 SPEF1Q9Y4P9 236 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 ATP23Q9Y6H3 246 aa7.27□□□□□ -1.25
CLIP1-206ENST00000535290 A0A1W2PR80 420 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 OR5H1A6NKK0 313 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 CBFA2T2O43439 604 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 BANF1O75531 89 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 SLU7O95391 586 aaKnown RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 PGM3O95394 542 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 ATP1B1P05026 303 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 HKR1P10072 659 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 PGAM1P18669 254 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 GGT1P19440 569 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 EPHA1P21709 976 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 PCMT1P22061 227 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 IGHV1-2P23083 117 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 PTX3P26022 381 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 APOBEC3AP31941 199 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 KRT20P35900 424 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 ARFIP1P53367 373 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 TAS2R39P59534 338 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 GPX6P59796 221 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 CHRNEQ04844 493 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 CCNIQ14094 377 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 TRIP10Q15642 601 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 HBMQ6B0K9 141 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 SULT1C3Q6IMI6 304 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 LIAT1Q6ZQX7 453 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 C1orf229Q6ZS94 237 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 P2RY8Q86VZ1 359 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 RNF10Q8N5U6 811 aaKnown RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 OR52N5Q8NH56 324 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 VSTM2LQ96N03 204 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 JMJD8Q96S16 334 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 VRK1Q99986 396 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 C1QTNF6Q9BXI9 259 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 UNKLQ9H9P5 680 aaKnown RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 PLAC1Q9HBJ0 212 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 MYOZ1Q9NP98 299 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-206ENST00000535290 SAYSD1Q9NPB0 183 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 MYNNQ9NPC7 610 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 MED29Q9NX70 200 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 CES1P1Q9UKY3 287 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 USP22Q9UPT9 525 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms