RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TSPAN14Q8NG11 270 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 NEIL3Q8TAT5 605 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 MZB1Q8WU39 189 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 RASSF5Q8WWW0 418 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 EXOSC8Q96B26 276 aaKnown RBP7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 OMA1Q96E52 524 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 L3HYPDHQ96EM0 354 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 APIPQ96GX9 242 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 LCORQ96JN0 433 aaPredicted RBP7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 RILPQ96NA2 401 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 KCNA7Q96RP8 456 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 SECISBP2Q96T21 854 aaKnown RBP7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 THTPAQ9BU02 230 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 CCDC106Q9BWC9 280 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 TEX15Q9BXT5 2789 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 ACPTQ9BZG2 426 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 GRIP2Q9C0E4 1043 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 METTL7AQ9H8H3 244 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 MID1IP1Q9NPA3 183 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 ACKR4Q9NPB9 350 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 KCNJ16Q9NPI9 418 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 NPDC1Q9NQX5 325 aaPredicted RBP7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 MKS1Q9NXB0 559 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 EHD3Q9NZN3 535 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 DCDC2Q9UHG0 476 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 DLGAP4Q9Y2H0 992 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 TIMM22Q9Y584 194 aa7.82□□□□□ -1.16
SFSWAP-202ENST00000535202 A0A0G2JNJ9 132 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 TRIM64A6NGJ6 449 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CRCPO75575 148 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 PPM1BO75688 479 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 TOXO94900 526 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 SNX4O95219 450 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 H6PDO95479 791 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ABCB1P08183 1280 aaPredicted RBP7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 GABRA1P14867 456 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ELAVL4P26378 380 aaKnown RBP7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 PEX2P28328 305 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 MSX1P28360 303 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 TIA1P31483 386 aaKnown RBP eCLIP7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ADH7P40394 386 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CASP3P42574 277 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ENTPD1P49961 510 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 FOXA1P55317 472 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 KRTAP10-9P60411 292 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC18A2Q05940 514 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 TFF3Q07654 80 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 IMPG1Q17R60 797 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF628Q5EBL2 1059 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 DESI1Q6ICB0 168 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 PPP4R4Q6NUP7 873 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ZYG11AQ6WRX3 759 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 WDR53Q7Z5U6 358 aaPredicted RBP7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CCDC116Q8IYX3 515 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ACBD4Q8NC06 268 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 OR9A2Q8NGT5 310 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CDC26Q8NHZ8 85 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ANGPTL6Q8NI99 470 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 C16orf78Q8WTQ4 265 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 STON2Q8WXE9 905 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 KAT2AQ92830 837 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CTHRC1Q96CG8 243 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CCDC126Q96EE4 140 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 C14orf79Q96F83 325 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 TMEM41AQ96HV5 264 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF681Q96N22 645 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 GNRHR2Q96P88 292 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 NODALQ96S42 347 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ANGPTL4Q9BY76 406 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 MROQ9BYG7 248 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 GSTO2Q9H4Y5 243 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ANKRA2Q9H9E1 313 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 GIMAP4Q9NUV9 329 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 KLRF1Q9NZS2 232 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 PRODH2Q9UF12 536 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 Q9UFV3 132 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF639Q9UID6 485 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 EMCNQ9ULC0 261 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 PRPF19Q9UMS4 504 aaKnown RBP7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ERGIC3Q9Y282 383 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC6A5Q9Y345 797 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 AP4B1Q9Y6B7 739 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 ITPR2Q14571 2701 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 CREBBPQ92793 2442 aa7.81□□□□□ -1.16
SFSWAP-202ENST00000535202 A0A087WXM4 84 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 C2orf72A6NCS6 295 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 FRG2CA6NGY1 282 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 G3V2L1 256 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 H3BNH8 94 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 H3BSA7 217 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 M0QX08 132 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 UBFD1O14562 309 aaKnown RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 ACOX3O15254 700 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 NDUFB5O43674 189 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 UGT2B11O75310 529 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 PROCP04070 461 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 HPNP05981 417 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 HOXD4P09016 255 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms