RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 NPAS1Q99742 590 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 EBPLQ9BY08 206 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 TBL1XR1Q9BZK7 514 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 OR10A4Q9H209 315 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
CTSB-230ENST00000534149 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 GPR52Q9Y2T5 361 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 UTP11Q9Y3A2 253 aaKnown RBP13.34□□□□□ -0.27
CTSB-230ENST00000534149 ALPK2Q86TB3 2170 aa13.34□□□□□ -0.27
CTSB-230ENST00000534149 ANK2Q01484 3957 aa13.33□□□□□ -0.27
CTSB-230ENST00000534149 PHF1O43189 567 aaPredicted RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 NDUFS7O75251 213 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 UTS2O95399 124 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 SYNGR4O95473 234 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 IL33O95760 270 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 ANGPTL1O95841 491 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 JUNP05412 331 aaKnown RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 HSD3B1P14060 373 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 HSD3B2P26439 372 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 AGTR1P30556 359 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 CSTF3Q12996 717 aaKnown RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 HEPACAMQ14CZ8 416 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 TSC22D1Q15714 1073 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 UBAP2Q5T6F2 1119 aaKnown RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 TMEM107Q6UX40 140 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 APOOLQ6UXV4 268 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 GALNT10Q86SR1 603 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 ATG4DQ86TL0 474 aaPredicted RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 ZNF619Q8N2I2 560 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 SPATA4Q8NEY3 305 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 SMAP2Q8WU79 429 aaPredicted RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 SLC9A6Q92581 669 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 APIPQ96GX9 242 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 ACPTQ9BZG2 426 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 Q9N2J8 555 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 STOML1Q9UBI4 398 aa13.33□□□□□ -0.28
CTSB-230ENST00000534149 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
CTSB-230ENST00000534149 A0A087WV62 115 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 IGLV3-32A0A0A0MS00 114 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 A0A1W2PP18 115 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 A8MT66 165 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 A8MV72 311 aaPredicted RBP13.32□□□□□ -0.28
CTSB-230ENST00000534149 TNFSF11O14788 317 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 KRT6AP02538 564 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 KRT6BP04259 564 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 C8BP07358 591 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 TUBBP07437 444 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 CD3EP07766 207 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 ZNF17P17021 662 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 TIA1P31483 386 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTSB-230ENST00000534149 MAGEA12P43365 314 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 KRT6CP48668 564 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 HTR6P50406 440 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 NCBP2P52298 156 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTSB-230ENST00000534149 ACSM2AQ08AH3 577 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 C17orf67Q0P5P2 114 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 TSNAXIP1Q2TAA8 658 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 GRAMD1BQ3KR37 738 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 ZNF672Q499Z4 452 aaPredicted RBP13.32□□□□□ -0.28
CTSB-230ENST00000534149 NCMAPQ5T1S8 102 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 ACSM2BQ68CK6 577 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 MFSD12Q6NUT3 480 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 DNM1P46Q6ZS02 220 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 WDR75Q8IWA0 830 aaKnown RBP13.32□□□□□ -0.28
CTSB-230ENST00000534149 CEP112Q8N8E3 955 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 STEAP2Q8NFT2 490 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 KBTBD8Q8NFY9 601 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 CDC26Q8NHZ8 85 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 TMEM185BQ9H7F4 350 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 GLRX2Q9NS18 164 aa13.32□□□□□ -0.28
CTSB-230ENST00000534149 GDF2Q9UK05 429 aaPredicted RBP13.32□□□□□ -0.28
CTSB-230ENST00000534149 C19orf53Q9UNZ5 99 aaPredicted RBP13.32□□□□□ -0.28
CTSB-230ENST00000534149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.288e-8■■■■■ 29.6
CTSB-230ENST00000534149 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 MYO1GB0I1T2 1018 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 UPK1AO00322 258 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 GCM2O75603 506 aaPredicted RBP13.31□□□□□ -0.28
CTSB-230ENST00000534149 PSMG1O95456 288 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 NTN1O95631 604 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 THBS1P07996 1170 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 SBK3P0C264 359 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 HSD17B3P37058 310 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 PRR5P85299 388 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 CLCQ05315 142 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 BTKQ06187 659 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 RASA2Q15283 850 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 ZNHIT3Q15649 155 aaPredicted RBP13.31□□□□□ -0.28
CTSB-230ENST00000534149 PGGHGQ32M88 737 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 FIGNL1Q6PIW4 674 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 OR2V1Q8NHB1 315 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 MRPL57Q9BQC6 102 aaKnown RBP13.31□□□□□ -0.28
CTSB-230ENST00000534149 C1QTNF3Q9BXJ4 246 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 RAB17Q9H0T7 212 aa13.31□□□□□ -0.28
CTSB-230ENST00000534149 MRPL46Q9H2W6 279 aaKnown RBP13.31□□□□□ -0.28
CTSB-230ENST00000534149 ESRP2Q9H6T0 727 aaKnown RBP13.31□□□□□ -0.28
CTSB-230ENST00000534149 DDX18Q9NVP1 670 aaKnown RBP13.31□□□□□ -0.28
CTSB-230ENST00000534149 FBXO34Q9NWN3 711 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms