RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 KBTBD8Q8NFY9 601 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 OR5M1Q8NGP8 315 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 KIF18AQ8NI77 898 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PPP1R35Q8TAP8 253 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ZPLD1Q8TCW7 415 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC2A12Q8TD20 617 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PAQR8Q8TEZ7 354 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF721Q8TF20 911 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 LRTOMTQ8WZ04 291 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 UCN3Q969E3 161 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SPACA9Q96E40 222 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SMIM10Q96HG1 83 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SENP5Q96HI0 755 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF48Q96MX3 618 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 RILPQ96NA2 401 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FOPNLQ96NB1 174 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 BIRC8Q96P09 236 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 KRT12Q99456 494 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 FERMT1Q9BQL6 677 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC39A3Q9BRY0 314 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 DOHHQ9BU89 302 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 C1QTNF5Q9BXJ0 243 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 C11orf54Q9H0W9 315 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 UBQLN3Q9H347 655 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PIGMQ9H3S5 423 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SERHLQ9NQF3 203 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CHRAC1Q9NRG0 131 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 PRTFDC1Q9NRG1 225 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 ANO10Q9NW15 660 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SH3BP4Q9P0V3 963 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CLCF1Q9UBD9 225 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 LPAR3Q9UBY5 353 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 KCNS2Q9ULS6 477 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CLEC4AQ9UMR7 237 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 BOKQ9UMX3 212 aaPredicted RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 NENFQ9UMX5 172 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CRYL1Q9Y2S2 319 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 C15orf41Q9Y2V0 281 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 AAR2Q9Y312 384 aaKnown RBP2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CLCA3PQ9Y6N3 262 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 SPACA6W5XKT8 324 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 CR1P17927 2039 aa2.64□□□□□ -1.99
CHMP4A-208ENST00000534106 DNAH9Q9NYC9 4486 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 HEATR5AQ86XA9 2040 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 hCG_1818297A0A087WSY0 165 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 A0A1W2PP18 115 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 A0A1W2PPL8 197 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 LRP5LA4QPB2 252 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PABPN1LA6NDY0 278 aaKnown RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 VGLL3A8MV65 326 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 HACD1B0YJ81 288 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF487B1APH4 448 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 B4DXG7 233 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PLOD2O00469 737 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 KIF5CO60282 957 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CTNSO60931 367 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SH3BGRLO75368 114 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CCNDBP1O95273 360 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PRB2P02812 416 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 OPN1LWP04000 364 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 ETS1P14921 441 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CPN1P15169 458 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 MALP21145 153 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SAT1P21673 171 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 USF1P22415 310 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CTNNA2P26232 953 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 NMBRP28336 390 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PTPN6P29350 595 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CASQ1P31415 396 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 IL2RGP31785 369 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SRP14P37108 136 aaKnown RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CASP3P42574 277 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 MSH2P43246 934 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC6A8P48029 635 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC6A12P48065 614 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC6A9P48067 706 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 LHX2P50458 406 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 ANXA11P50995 505 aaKnown RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 NUDT6P53370 316 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PLA2G16P53816 162 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 CLDN18P56856 261 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 EIF3EP60228 445 aaKnown RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 TBPL1P62380 186 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SSBP2P81877 361 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 GABPB1Q06547 395 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PIGFQ07326 219 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 GAB1Q13480 694 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 DOC2AQ14183 400 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 RCAN2Q14206 197 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 SQLEQ14534 574 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 ARHGAP19Q14CB8 494 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 RBBP5Q15291 538 aaKnown RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 RPS6KA1Q15418 735 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 MPEG1Q2M385 716 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 C18orf21Q32NC0 220 aaPredicted RBP2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 KBTBD12Q3ZCT8 623 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 AWAT1Q58HT5 328 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 PLAC9Q5JTB6 97 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 MORN5Q5VZ52 161 aa2.63□□□□□ -1.99
CHMP4A-208ENST00000534106 RUSC1-AS1Q66K80 236 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms