RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 GDF1P27539 372 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 MAGEA8P43361 318 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 TXNL4AP83876 142 aaKnown RBP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 KLF10Q13118 480 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ELOAQ14241 798 aaKnown RBP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ATAD3BQ5T9A4 648 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 AP1ARQ63HQ0 302 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 DLEU7Q6UYE1 221 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 TRILQ7L0X0 811 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 OLIG3Q7RTU3 272 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 RETREG3Q86VR2 466 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 PLCZ1Q86YW0 608 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 TBL1XR1Q9BZK7 514 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 NMUR2Q9GZQ4 415 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 FAM107BQ9H098 131 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ACKR4Q9NPB9 350 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 MRGBPQ9NV56 204 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 EXD2Q9NVH0 621 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 B4GALT7Q9UBV7 327 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 LEF1Q9UJU2 399 aaPredicted RBP10.93□□□□□ -0.66
SSBP3-214ENST00000533209 OSGIN2Q9Y236 505 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 ZNF835Q9Y2P0 537 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 NDUFAF1Q9Y375 327 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 RELNP78509 3460 aa10.93□□□□□ -0.66
SSBP3-214ENST00000533209 A0A1B0GTH9 108 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 A0A1W2PQD3 144 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 CLIC1O00299 241 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 FBP2O00757 339 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 SUSD5O60279 629 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 FCMRO60667 390 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 HCN1O60741 890 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 STX11O75558 287 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 CBR3O75828 277 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ANGPTL1O95841 491 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 HPNP05981 417 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ETFAP13804 333 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ADSLP30566 484 aaPredicted RBP10.92□□□□□ -0.66
SSBP3-214ENST00000533209 DCTP40126 519 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 CLK3P49761 638 aaKnown RBP10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ANXA11P50995 505 aaKnown RBP10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ATP12AP54707 1039 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 STX5Q13190 355 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 SYPL1Q16563 259 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 FLYWCH1Q4VC44 716 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 OR5M10Q6IEU7 315 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 C16orf62Q7Z3J2 963 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 CPLX4Q7Z7G2 160 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 SPPL2CQ8IUH8 684 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 DPP10Q8N608 796 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 FADS6Q8N9I5 356 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 PRR7Q8TB68 274 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 DUSP19Q8WTR2 217 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ROPN1LQ96C74 230 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 ZNF350Q9GZX5 532 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 HOXD1Q9GZZ0 328 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 SAP130Q9H0E3 1048 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 NSRP1Q9H0G5 558 aaKnown RBP10.92□□□□□ -0.66
SSBP3-214ENST00000533209 SLC6A15Q9H2J7 730 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 VAPAQ9P0L0 249 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 PPP4R1LQ9P1A2 415 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 KCNE5Q9UJ90 142 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 FBXL2Q9UKC9 423 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 MKLN1Q9UL63 735 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 GMEB1Q9Y692 573 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 NINQ8N4C6 2090 aa10.92□□□□□ -0.66
SSBP3-214ENST00000533209 IGLV3-32A0A0A0MS00 114 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 TRGV5A0A0B4J1U4 118 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 CENPVL1A0A0U1RR11 272 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 ANGPT2O15123 496 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 SLC22A2O15244 555 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 SLC19A2O60779 497 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 TRAPPC6AO75865 159 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 H6PDO95479 791 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 GUSBP08236 651 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 STSP08842 583 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 ENDOUP21128 410 aaKnown RBP10.91□□□□□ -0.66
SSBP3-214ENST00000533209 CRATP43155 626 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 KCNC4Q03721 635 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 RBPJQ06330 500 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 RGNQ15493 299 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 MAPK11Q15759 364 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 CD226Q15762 336 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 KLHL26Q53HC5 615 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 TYW3Q6IPR3 259 aaKnown RBP10.91□□□□□ -0.66
SSBP3-214ENST00000533209 ARHGAP11AQ6P4F7 1023 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 FRRS1Q6ZNA5 592 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 Q6ZPB1 254 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-214ENST00000533209 MTDHQ86UE4 582 aaKnown RBP10.91□□□□□ -0.66
SSBP3-214ENST00000533209 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 GATSQ8NAP1 163 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 FAM83FQ8NEG4 500 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-214ENST00000533209 OR2M3Q8NG83 312 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 OR4K17Q8NGC6 315 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 NEIL3Q8TAT5 605 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 TRNT1Q96Q11 434 aaKnown RBP10.91□□□□□ -0.66
SSBP3-214ENST00000533209 OR2B2Q9GZK3 357 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 DSN1Q9H410 356 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 RAD21L1Q9H4I0 556 aa10.91□□□□□ -0.66
SSBP3-214ENST00000533209 POLE3Q9NRF9 147 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms