RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SLC39A3Q9BRY0 314 aa10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 RBCK1Q9BYM8 510 aa10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 PAIP1Q9H074 479 aaKnown RBP10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 CLK4Q9HAZ1 481 aaKnown RBP10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC35C2Q9NQQ7 365 aa10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 EHD3Q9NZN3 535 aa10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 PSME2Q9UL46 239 aa10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 PRPF19Q9UMS4 504 aaKnown RBP10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 LIPGQ9Y5X9 500 aa10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC4-213ENST00000533149 A8MVJ9 347 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 RNASET2O00584 256 aaKnown RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 HCN1O60741 890 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 ERAL1O75616 437 aaKnown RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 ANP32DO95626 131 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 C6orf47O95873 294 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 NR2F6P10588 404 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC6A2P23975 617 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 BUD31P41223 144 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 MAGEA5P43359 124 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 CLCN2P51788 898 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 HNRNPFP52597 415 aaKnown RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 RAB38P57729 211 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 CORO7P57737 925 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 TNFRSF17Q02223 184 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 LRRC74AQ0VAA2 488 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC10A1Q14973 349 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 POU4F3Q15319 338 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 GTDC1Q4AE62 458 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 RUNDC3AQ59EK9 446 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 LRIF1Q5T3J3 769 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 NANOGP8Q6NSW7 305 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 FAM180BQ6P0A1 224 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC48A1Q6P1K1 146 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 PGM2L1Q6PCE3 622 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 ZNF621Q6ZSS3 439 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SCUBE1Q8IWY4 988 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 MSRB3Q8IXL7 192 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC15A3Q8IY34 581 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 ARHGAP24Q8N264 748 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 TMEM251Q8N6I4 163 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 NFAM1Q8NET5 270 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 OR5P2Q8WZ92 322 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 PTCHD1Q96NR3 888 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 DACH2Q96NX9 599 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 PANX1Q96RD7 426 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 BBS4Q96RK4 519 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 CSF3RQ99062 836 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 FAM173AQ9BQD7 235 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 CNPPD1Q9BV87 410 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 MMADHCQ9H3L0 296 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 EXO5Q9H790 373 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 NANOGQ9H9S0 305 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC6A13Q9NSD5 602 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 HPF1Q9NWY4 346 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 CMTM6Q9NX76 183 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SLC25A37Q9NYZ2 338 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 ADA2Q9NZK5 511 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 VAPAQ9P0L0 249 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 TMEM181Q9P2C4 612 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 UTS2RQ9UKP6 389 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 PACSIN3Q9UKS6 424 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 PCDHGB4Q9UN71 923 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 YARS2Q9Y2Z4 477 aaKnown RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 PCDHB14Q9Y5E9 798 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 SPACA6W5XKT8 324 aa10.34□□□□□ -0.75
TRAPPC4-213ENST00000533149 TRBV5-3A0A0A0MS03 114 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TRGV5A0A0B4J1U4 118 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TRBV11-1A0A0K0K1C0 115 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 MYO1GB0I1T2 1018 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 PDPK1O15530 556 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CNOT4O95628 575 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 RNH1P13489 461 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CSNK2A2P19784 350 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 FPR1P21462 350 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CNR1P21554 472 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 PTPN6P29350 595 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 SLC7A2P52569 658 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 MANFP55145 182 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CEACAM7Q14002 265 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 HYAL4Q2M3T9 481 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF750Q32MQ0 723 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 DNAJC14Q6Y2X3 702 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 QSOX2Q6ZRP7 698 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF551Q7Z340 670 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ULK2Q8IYT8 1036 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TMEM52Q8NDY8 209 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 B3GNT7Q8NFL0 401 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR4A15Q8NGL6 344 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 TANKQ92844 425 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 CNRIP1Q96F85 164 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ANKRD27Q96NW4 1050 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 RPF2Q9H7B2 306 aaKnown RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 SPAG4Q9NPE6 437 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 PRDM9Q9NQV7 894 aa10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 ACSS1Q9NUB1 689 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC4-213ENST00000533149 MPDZO75970 2070 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms