RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SRYQ05066 204 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 APOOLQ6UXV4 268 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 GALNT10Q86SR1 603 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 DMRTC2Q8IXT2 367 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 MBD3L2Q8NHZ7 208 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 JADE3Q92613 823 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 OTUB1Q96FW1 271 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 TUBA1CQ9BQE3 449 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 DUSP26Q9BV47 211 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 CXorf36Q9H7Y0 433 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 PTGES2Q9H7Z7 377 aa27.46■■□□□ 1.99
SSSCA1-207ENST00000533115 DVL2O14641 736 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 ANGPTL1O95841 491 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 CCT3P49368 545 aaKnown RBP27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 WDR4P57081 412 aaKnown RBP27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 B3GALT5-AS1P59052 145 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 GANABQ14697 944 aaKnown RBP27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 LASP1Q14847 261 aaKnown RBP27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 CPEB4Q17RY0 729 aaKnown RBP eCLIP27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 FIGNL1Q6PIW4 674 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 CAMKMTQ7Z624 323 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 COX18Q8N8Q8 333 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 OR56A1Q8NGH5 318 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 PNPOQ9NVS9 261 aa27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 ZNF629Q9UEG4 869 aaPredicted RBP27.45■■□□□ 1.98
SSSCA1-207ENST00000533115 KIAA1549Q9HCM3 1950 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 HK1P19367 917 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 BMP5P22003 454 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 C17orf67Q0P5P2 114 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 PGS1Q32NB8 556 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 SPDYE7PQ495Y7 208 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 STACQ99469 402 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 NUF2Q9BZD4 464 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 NEUROD4Q9HD90 331 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 DUSP22Q9NRW4 184 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 GIN1Q9NXP7 522 aa27.44■■□□□ 1.98
SSSCA1-207ENST00000533115 MYO9AB2RTY4 2548 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 IGLV3-32A0A0A0MS00 114 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 NGFRP08138 427 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 ZNF708P17019 499 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 LCN1P31025 176 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 ZNF136P52737 540 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 SLC18A1P54219 525 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 CLDN18P56856 261 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 MAGOHP61326 146 aaKnown RBP27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 POU6F2P78424 691 aaPredicted RBP27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 POMZP3Q6PJE2 187 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 ADGRE4PQ86SQ3 457 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 LRRC34Q8IZ02 419 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 RELL2Q8NC24 303 aaPredicted RBP27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 OR4C3Q8NH37 302 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 SFXN5Q8TD22 340 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 MGARPQ8TDB4 240 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 CHMP6Q96FZ7 201 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 BTBD2Q9BX70 525 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 PIGUQ9H490 435 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 TMBIM4Q9HC24 238 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 FBXO34Q9NWN3 711 aa27.43■■□□□ 1.98
SSSCA1-207ENST00000533115 ALG1L2C9J202 215 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 CFLARO15519 480 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 OXSR1O95747 527 aaPredicted RBP27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 TBXA2RP21731 343 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 TP53BP2Q13625 1128 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 BCL2A1Q16548 175 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 CDC73Q6P1J9 531 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 ZAR1Q86SH2 424 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 C9orf106Q8NAJ2 232 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 CDS1Q92903 461 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 MOAP1Q96BY2 351 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 TLCD1Q96CP7 247 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 C1GALT1C1Q96EU7 318 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 LURAP1Q96LR2 239 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 UCN2Q96RP3 112 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 G6PC3Q9BUM1 346 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 ACTRT3Q9BYD9 372 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 MEAF6Q9HAF1 191 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 GPATCH2Q9NW75 528 aa27.42■■□□□ 1.98
SSSCA1-207ENST00000533115 TACC2O95359 2948 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 NUP214P35658 2090 aaPredicted RBP27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 CLCA1A8K7I4 914 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 LBPP18428 481 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 DLX5P56178 289 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 HBA1P69905 142 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 TLE4Q04727 773 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 CCNJQ5T5M9 372 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 RAET1LQ5VY80 246 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 DPY30Q9C005 99 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 HHATLQ9HCP6 504 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 UBQLN4Q9NRR5 601 aa27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 FAF1Q9UNN5 650 aaPredicted RBP27.41■■□□□ 1.98
SSSCA1-207ENST00000533115 NDUFB5O43674 189 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 KRT16P08779 473 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 PEPDP12955 493 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 CTSSP25774 331 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 OR4F3Q6IEY1 312 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 ADAMTS15Q8TE58 950 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 SLC24A3Q9HC58 644 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 THAP1Q9NVV9 213 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 NKIRAS1Q9NYS0 192 aa27.4■■□□□ 1.98
SSSCA1-207ENST00000533115 DOCK7Q96N67 2140 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms