RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PITX2Q99697 317 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 MKRN2Q9H000 416 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 TMEM45AQ9NWC5 275 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 CBLCQ9ULV8 474 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 EDARQ9UNE0 448 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 PLEKHM1Q9Y4G2 1056 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 OR5K3A6NET4 321 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 POM121BA6NF01 834 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 CKMT1AP12532 417 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 EEF1A1P68104 462 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 RPL19P84098 196 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ALG10Q5BKT4 473 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 LCN8Q6JVE9 175 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ETFBKMTQ8IXQ9 262 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 HS3ST5Q8IZT8 346 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 OR5T2Q8NGG2 359 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 NEIL3Q8TAT5 605 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 UCN3Q969E3 161 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 IP6K3Q96PC2 410 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 RBM24Q9BX46 236 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 SLC35A3Q9Y2D2 325 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 NOP16Q9Y3C1 178 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 CD79AP11912 226 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 CPMP14384 443 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 S100A1P23297 94 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 APLNRP35414 380 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 HTR3AP46098 478 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 PTPRRQ15256 657 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 PYHIN1Q6K0P9 492 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 PAPD4Q6PIY7 484 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF517Q6ZMY9 492 aaPredicted RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 OR1J4Q8NGS1 313 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 WBP2Q969T9 261 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 SYT11Q9BT88 431 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 SLC6A15Q9H2J7 730 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 FKBP14Q9NWM8 211 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ABCD2Q9UBJ2 740 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 CITO14578 2027 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 SMIM30A4D0T7 59 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 MMP2P08253 660 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 PNMTP11086 282 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 GRK5P34947 590 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 GPR4P46093 362 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 EXOSC7Q15024 291 aaKnown RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 LIPKQ5VXJ0 399 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 KIAA0907Q7Z7F0 614 aaPredicted RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 ELP5Q8TE02 316 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 MUCL1Q96DR8 90 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 LOC100509620A0A075B734 347 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 TRAPPC13A5PLN9 417 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 ARGFXA6NJG6 315 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 CDK4P11802 303 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 OPRD1P41143 372 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 MAGEA6P43360 314 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 EXT1Q16394 746 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 EIF5AL1Q6IS14 154 aaKnown RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 TMEM53Q6P2H8 277 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 PROKR1Q8TCW9 393 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 CIDECQ96AQ7 238 aaPredicted RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 CNN2Q99439 309 aaKnown RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 MMP27Q9H306 513 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 GSTO2Q9H4Y5 243 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 KIR3DX1Q9H7L2 352 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 BRWD3Q6RI45 1802 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 GABRG2P18507 467 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 RIDAP52758 137 aaKnown RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 PPP2CBP62714 309 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 PPP2CAP67775 309 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 RGNQ15493 299 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 PYCR3Q53H96 274 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 FCAMRQ8WWV6 532 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 MYNNQ9NPC7 610 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 SH2B3Q9UQQ2 575 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 TMEM202A6NGA9 273 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 PHYHO14832 338 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 APOL3O95236 402 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 ADAP00813 363 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 TMBIM6P55061 237 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 S100A10P60903 97 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 MELKQ14680 651 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 LRFN4Q6PJG9 635 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 CEACAM19Q7Z692 300 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 LHFPL3Q86UP9 236 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 OR8S1Q8NH09 359 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 LRR1Q96L50 414 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 NTMT1Q9BV86 223 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 BTNL2Q9UIR0 455 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 HSPE1-MOB4S4R3N1 261 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF423Q2M1K9 1284 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 SLC22A16Q86VW1 577 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 OR8H3Q8N146 312 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 SLC41A3Q96GZ6 507 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 THOC3Q96J01 351 aaKnown RBP10.62□□□□□ -0.71
PTPRK-221ENST00000532331 TXLNGYQ9BZA5 131 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 FAM118AQ9NWS6 357 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 ERVK-18Q9QC07 812 aa10.62□□□□□ -0.71
PTPRK-221ENST00000532331 LAMB1P07942 1786 aa10.61□□□□□ -0.71
PTPRK-221ENST00000532331 SLITRK5O94991 958 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms