RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 OSTF1Q92882 214 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 ERP44Q9BS26 406 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 HDHD5Q9BXW7 423 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 ZBTB26Q9HCK0 441 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 Q9N2J8 555 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 SLC35C2Q9NQQ7 365 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 CISD1Q9NZ45 108 aaKnown RBP8.25□□□□□ -1.09
NEDD8-206ENST00000531430 WHRNQ9P202 907 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 XPR1Q9UBH6 696 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 VPS29Q9UBQ0 182 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 PCTPQ9UKL6 214 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 SAR1BQ9Y6B6 198 aa8.25□□□□□ -1.09
NEDD8-206ENST00000531430 CR1P17927 2039 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 IGHV4-30-2A0A087WSY4 118 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 UBFD1O14562 309 aaKnown RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 PCDH7O60245 1069 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 SS18L1O75177 396 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 COQ9O75208 318 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 OR4F21O95013 312 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 UTS2O95399 124 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 ADAP00813 363 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 TUBBP07437 444 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 RBP1P09455 135 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 DANCRP0C864 163 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 CTAGE8P0CG41 777 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 PYGBP11216 843 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 CHN1P15882 459 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 IL11P20809 199 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 NCBP2P52298 156 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 PSMD4P55036 377 aaKnown RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 CARD18P57730 90 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 C21orf58P58505 322 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 ZNF844Q08AG5 666 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 CSTF3Q12996 717 aaKnown RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 TRAF3Q13114 568 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 HEPACAMQ14CZ8 416 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 GUSBP1Q15486 140 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 ZNHIT3Q15649 155 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 TAB1Q15750 504 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 ZNF672Q499Z4 452 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 GLYR1Q49A26 553 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 CYP27C1Q4G0S4 372 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 TCHHL1Q5QJ38 904 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 HBMQ6B0K9 141 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 TMEM107Q6UX40 140 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 NUFIP2Q7Z417 695 aaKnown RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 ATG4DQ86TL0 474 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 GGNQ86UU5 652 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 EXOC3L1Q86VI1 746 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 CTAGE4Q8IX94 777 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 SAMD14Q8IZD0 417 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 OR2V1Q8NHB1 315 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 C16orf78Q8WTQ4 265 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 HSD17B8Q92506 261 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 SH3YL1Q96HL8 342 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 GPR78Q96P69 363 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 C19orf24Q9BVV8 132 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 EBPLQ9BY08 206 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 SHARPINQ9H0F6 387 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 LRTM1Q9HBL6 345 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 BARX1Q9HBU1 254 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-206ENST00000531430 EQTNQ9NQ60 294 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 GLRX2Q9NS18 164 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 SNX8Q9Y5X2 465 aa8.24□□□□□ -1.09
NEDD8-206ENST00000531430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.24□□□□□ -1.092e-8■■■■□ 21.7
NEDD8-206ENST00000531430 A0A0J9YW62 118 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 GXYLT2A0PJZ3 443 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 DPRXA6NFQ7 191 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 C9JVG2 144 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 MANBAO00462 879 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PLOD3O60568 738 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 RAMP1O60894 148 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 IL33O95760 270 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 OTCP00480 354 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 KRT6AP02538 564 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 KRT6BP04259 564 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 HPGDP15428 266 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PSMB1P20618 241 aaKnown RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ME2P23368 584 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 HMOX2P30519 316 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 SFTPDP35247 375 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 KRT6CP48668 564 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 SERPINB8P50452 374 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ZNF41P51814 821 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PRKAG1P54619 331 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PSPHP78330 225 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PSG6Q00889 435 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 BSPH1Q075Z2 132 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ACSM2AQ08AH3 577 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 RAB35Q15286 201 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 TMEM249Q2WGJ8 235 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PGGHGQ32M88 737 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 GRAMD1BQ3KR37 738 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 TECRLQ5HYJ1 363 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 SPDYAQ5MJ70 313 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 SFRP5Q5T4F7 317 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 C6orf52Q5T4I8 152 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 CPTPQ5TA50 214 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms