RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SHCBP1LQ9BZQ2 653 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 SIRT5Q9NXA8 310 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 VDAC3Q9Y277 283 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 AP4B1Q9Y6B7 739 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 CR1P17927 2039 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 ATRQ13535 2644 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 LINC01387J3KSC0 135 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 EIF1AYO14602 144 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 ANGPTL1O95841 491 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 IGKV1D-16P01601 117 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 NTSP30990 170 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 GSTM5P46439 218 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 EIF1AXP47813 144 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 PTH2RP49190 550 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 CLK3P49761 638 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 FGFBP1Q14512 234 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 ZNHIT3Q15649 155 aaPredicted RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 GALNT10Q86SR1 603 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 SLC22A9Q8IVM8 553 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 PIK3R3Q92569 461 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 SLC9A6Q92581 669 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 GFM2Q969S9 779 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 NPAS1Q99742 590 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 MDFIQ99750 246 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 LMF2Q9BU23 707 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 MYNNQ9NPC7 610 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 EQTNQ9NQ60 294 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 GRID1Q9ULK0 1009 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 STK38LQ9Y2H1 464 aa16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 NUP214P35658 2090 aaPredicted RBP16.53■□□□□ 0.24
SSSCA1-206ENST00000531405 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 SERTM1A2A2V5 107 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 CCDC151A5D8V7 595 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 INAFM1C9JVW0 142 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 KLF4O43474 513 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 SLITRK5O94991 958 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 PLAUP00749 431 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 OPN1LWP04000 364 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 FCGR2AP12318 317 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 GABRA3P34903 492 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 IMPG1Q17R60 797 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 TMEM44Q2T9K0 475 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 GLYR1Q49A26 553 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 ZNF551Q7Z340 670 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 EXOC3L1Q86VI1 746 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 CCNYL1Q8N7R7 359 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 CAVIN3Q969G5 261 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 PRRG4Q9BZD6 226 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 GSX2Q9BZM3 304 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 TAS2R7Q9NYW3 318 aa16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 MRTO4Q9UKD2 239 aaKnown RBP16.52■□□□□ 0.24
SSSCA1-206ENST00000531405 MXRA5Q9NR99 2828 aa16.52■□□□□ 0.23
SSSCA1-206ENST00000531405 UQCRHLA0A096LP55 91 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 IGLV3-32A0A0A0MS00 114 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 CNOT4O95628 575 aaKnown RBP16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 PSMD4P55036 377 aaKnown RBP16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 PRR5P85299 388 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 C17orf67Q0P5P2 114 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 HSPB3Q12988 150 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 WHAMMP3Q1A5X7 153 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 PLEKHM3Q6ZWE6 761 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 GATSQ8NAP1 163 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 IGFBPL1Q8WX77 278 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 EGLN2Q96KS0 407 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 C16orf45Q96MC5 204 aaPredicted RBP16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 PLSCR4Q9NRQ2 329 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 EMC9Q9Y3B6 208 aa16.51■□□□□ 0.23
SSSCA1-206ENST00000531405 PLGP00747 810 aaPredicted RBP16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 PYGBP11216 843 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 CTBP2P56545 445 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 OCRLQ01968 901 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 BEX5Q5H9J7 111 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 ANKRD26P1Q6NSI1 321 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 NOXRED1Q6NXP6 359 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 STAC2Q6ZMT1 411 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 ZNF704Q6ZNC4 412 aaPredicted RBP16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 LCA5Q86VQ0 697 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 OR6K3Q8NGY3 331 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 OR10D3Q8NH80 312 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 FBXO30Q8TB52 745 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 GPR151Q8TDV0 419 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 TNFRSF12AQ9NP84 129 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 EMCNQ9ULC0 261 aa16.5■□□□□ 0.23
SSSCA1-206ENST00000531405 CADP27708 2225 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 SS18L1O75177 396 aaPredicted RBP16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 KCNH1O95259 989 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 ABHD2P08910 425 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 CTU2Q2VPK5 515 aaKnown RBP16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 WFDC8Q8IUA0 241 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 CIDECQ96AQ7 238 aaPredicted RBP16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 PLPPR2Q96GM1 343 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 GMPPAQ96IJ6 420 aaPredicted RBP16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 ADGRG7Q96K78 797 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 KLHDC3Q9BQ90 382 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 TMEM185BQ9H7F4 350 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 C3orf14Q9HBI5 128 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 PTGDR2Q9Y5Y4 395 aa16.49■□□□□ 0.23
SSSCA1-206ENST00000531405 G3V2L1 256 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms