RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	PERP	Q96FX8	193 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ZC3HAV1L	Q96H79	300 aa	Known RBP	14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	HS3ST6	Q96QI5	342 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GSX2	Q9BZM3	304 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	KLHL4	Q9C0H6	718 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GSTO2	Q9H4Y5	243 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	MID1IP1	Q9NPA3	183 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	FANCF	Q9NPI8	374 aa		14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PAQR5	Q9NXK6	330 aa	Predicted RBP	14	□□□□□ -0.17
TM9SF1-209	ENST00000530468	TMCC2	O75069	709 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	RSL1D1	O76021	490 aa	Known RBP	13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	AQP8	O94778	261 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	UTS2	O95399	124 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ANGPTL1	O95841	491 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	RFX3	P48380	749 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	VPS26B	Q4G0F5	336 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	BEX5	Q5H9J7	111 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PLEKHM3	Q6ZWE6	761 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	TRIM46	Q7Z4K8	759 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GGN	Q86UU5	652 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	CCNYL1	Q8N7R7	359 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PPP1R14C	Q8TAE6	165 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	METTL2A	Q96IZ6	378 aa	Known RBP	13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PRRG4	Q9BZD6	226 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PLSCR4	Q9NRQ2	329 aa		13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468	POLR3H	Q9Y535	204 aa	Predicted RBP	13.99	□□□□□ -0.17
TM9SF1-209	ENST00000530468		A0A087WZY1	265 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	EIF1AY	O14602	144 aa	Known RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PLG	P00747	810 aa	Predicted RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GABRA3	P34903	492 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	EIF1AX	P47813	144 aa	Known RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	NR1H2	P55055	460 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	FOXA1	P55317	472 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	CTBP2	P56545	445 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	EXOC3L2	Q2M3D2	409 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GRAMD1B	Q3KR37	738 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	NOXRED1	Q6NXP6	359 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	WDR75	Q8IWA0	830 aa	Known RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ZNF764	Q96H86	408 aa	Predicted RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	C16orf45	Q96MC5	204 aa	Predicted RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	IQCG	Q9H095	443 aa	Known RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GLRX2	Q9NS18	164 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	DCDC2	Q9UHG0	476 aa		13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	MCTS1	Q9ULC4	181 aa	Known RBP	13.98	□□□□□ -0.17
TM9SF1-209	ENST00000530468	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ALG1L2	C9J202	215 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GOLGA8R	I6L899	631 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	UBFD1	O14562	309 aa	Known RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SMAD7	O15105	426 aa	Known RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	RIPK2	O43353	540 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SS18L1	O75177	396 aa	Predicted RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	CRCP	O75575	148 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	NGFR	P08138	427 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	MYL2	P10916	166 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PRPS2	P11908	318 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PAX1	P15863	534 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	IL11	P20809	199 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PTH2R	P49190	550 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SLC29A2	Q14542	456 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ANKRD34A	Q69YU3	496 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PPP4R4	Q6NUP7	873 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	APOOL	Q6UXV4	268 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	FRMD7	Q6ZUT3	714 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	C22orf34	Q6ZV56	151 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	CEP70	Q8NHQ1	597 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GPR151	Q8TDV0	419 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	HOXB13	Q92826	284 aa	Predicted RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ZBTB8A	Q96BR9	441 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	OR10A4	Q9H209	315 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	VDAC3	Q9Y277	283 aa		13.97	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GXYLT2	A0PJZ3	443 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	C7orf72	A4D263	438 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	TRIM64	A6NGJ6	449 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	TRIM64B	A6NI03	449 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SHISA8	B8ZZ34	492 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PDPK1	O15530	556 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	KLF4	O43474	513 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	NDUFB5	O43674	189 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GMFG	O60234	142 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GLRA3	O75311	464 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	NKX2-2	O95096	273 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SYNGR4	O95473	234 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	IGKV1D-16	P01601	117 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	THBD	P07204	575 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PYGB	P11216	843 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	GPC1	P35052	558 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	MAP3K8	P41279	467 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SLC6A8	P48029	635 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	PPP2R2B	Q00005	443 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	HSPB3	Q12988	150 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	ZYG11A	Q6WRX3	759 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	STAC2	Q6ZMT1	411 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	BEND4	Q6ZU67	534 aa		13.96	□□□□□ -0.17
TM9SF1-209	ENST00000530468	SH2D5	Q6ZV89	423 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms