RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 DUSP2Q05923 314 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 C17orf67Q0P5P2 114 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 ZNF155Q12901 538 aaPredicted RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 DECR1Q16698 335 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 TMEM249Q2WGJ8 235 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 ZNF672Q499Z4 452 aaPredicted RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 CYP27C1Q4G0S4 372 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 TMEM201Q5SNT2 666 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 LGSNQ5TDP6 509 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 FAM180BQ6P0A1 224 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 CLEC2AQ6UVW9 174 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 NPSR1Q6W5P4 371 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 DNAJC14Q6Y2X3 702 aaPredicted RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 DNM1P46Q6ZS02 220 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 OR9A2Q8NGT5 310 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 OR10D3Q8NH80 312 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 LILRB1Q8NHL6 650 aaPredicted RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 EXOSC8Q96B26 276 aaKnown RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 S100PBPQ96BU1 408 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 C11orf24Q96F05 449 aaPredicted RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 REXO5Q96IC2 774 aaKnown RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 ADAD1Q96M93 576 aaKnown RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 ZNF681Q96N22 645 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 TNFRSF13CQ96RJ3 184 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 TBL1XR1Q9BZK7 514 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 C12orf49Q9H741 205 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 ANKRA2Q9H9E1 313 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 HHATLQ9HCP6 504 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 TMEM160Q9NX00 188 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 FAM120CQ9NX05 1096 aaKnown RBP8.03□□□□□ -1.12
VPS11-203ENST00000529545 XPR1Q9UBH6 696 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 TMCO1Q9UM00 188 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 NFU1Q9UMS0 254 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 SNX24Q9Y343 169 aa8.03□□□□□ -1.12
VPS11-203ENST00000529545 FAM234BA2RU67 622 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 B4DXG7 233 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 UBFD1O14562 309 aaKnown RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 TP73O15350 636 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 NDUFB5O43674 189 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 FADS1O60427 444 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 PLOD3O60568 738 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 COQ9O75208 318 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 NDUFS7O75251 213 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 NME6O75414 186 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 KLHL2O95198 593 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 ZNF17P17021 662 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 ME2P23368 584 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 ADH6P28332 368 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 STX2P32856 288 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 MPIP34949 423 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 MAP2K3P46734 347 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 RFX3P48380 749 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 CASP9P55211 416 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 ZNF844Q08AG5 666 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 GALNT1Q10472 559 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 NAB1Q13506 487 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 ZNHIT3Q15649 155 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.02□□□□□ -1.13
VPS11-203ENST00000529545 AGAP6Q5VW22 663 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 CYB5R2Q6BCY4 276 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 MARCH3Q86UD3 253 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 GGNQ86UU5 652 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 GAS2L3Q86XJ1 694 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 FAM9CQ8IZT9 166 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 CENPLQ8N0S6 344 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 C1orf52Q8N6N3 182 aaKnown RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 PTGR2Q8N8N7 351 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 OR4N2Q8NGD1 307 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 SELENOMQ8WWX9 145 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 TRAF4Q9BUZ4 470 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 BRF2Q9HAW0 419 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 Q9N2J8 555 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 FBXO34Q9NWN3 711 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 CISD1Q9NZ45 108 aaKnown RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 GDF2Q9UK05 429 aaPredicted RBP8.02□□□□□ -1.13
VPS11-203ENST00000529545 SNX6Q9UNH7 406 aa8.02□□□□□ -1.13
VPS11-203ENST00000529545 IGHV4-30-2A0A087WSY4 118 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 A0A087WZY1 265 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 A0A096LPK6 155 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 GNG14A0A1W2PPG7 69 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 CCDC188H7C350 402 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 CXCL13O43927 109 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 GMFGO60234 142 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 SMIM24O75264 130 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 OTCP00480 354 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 PDYNP01213 254 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 C2P06681 752 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 THBS1P07996 1170 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 SLC25A16P16260 332 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 SRD5A1P18405 259 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 AGTR1P30556 359 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 VLDLRP98155 873 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 IRF9Q00978 393 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 BSPH1Q075Z2 132 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 LOXL1Q08397 574 aaPredicted RBP8.01□□□□□ -1.13
VPS11-203ENST00000529545 HEPACAMQ14CZ8 416 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 TAB1Q15750 504 aa8.01□□□□□ -1.13
VPS11-203ENST00000529545 PGGHGQ32M88 737 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms