RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CDC40O60508 579 aaKnown RBP eCLIP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 PLOD3O60568 738 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 TBX19O60806 448 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 TRIM3O75382 744 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 BCAS2O75934 225 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 DNAJC8O75937 253 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 LRATO95237 230 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 JUNP05412 331 aaKnown RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 CELA3AP09093 270 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 CT45A8P0DMV1 189 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 CT45A9P0DMV2 189 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 NEFHP12036 1026 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ABOP16442 354 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 NAGAP17050 411 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 SDC1P18827 310 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 CFPP27918 469 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 MPIP34949 423 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 PTGS2P35354 604 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 PTGDSP41222 190 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 SERPINB4P48594 390 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 NRG3P56975 720 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 RPL38P63173 70 aaKnown RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 SNCBQ16143 134 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 NNATQ16517 81 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ZNF385BQ569K4 471 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 CT45A2Q5DJT8 189 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 SH2D4BQ5SQS7 431 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 FNDC7Q5VTL7 733 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 BICRALQ6AI39 1079 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ARHGAP11AQ6P4F7 1023 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 TMEM81Q6P7N7 255 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ARSKQ6UWY0 536 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 NPSR1Q6W5P4 371 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 IKBIPQ70UQ0 350 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 SLC22A16Q86VW1 577 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 NUDCD3Q8IVD9 361 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 HOMEZQ8IX15 550 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 FAM9CQ8IZT9 166 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 FAM109AQ8N4B1 249 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 OR7G2Q8NG99 324 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 OR5M3Q8NGP4 307 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 DIO2Q92813 273 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 HGDQ93099 445 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 PGM2Q96G03 612 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 C3orf30Q96M34 536 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 VSTM2LQ96N03 204 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 AMDHD1Q96NU7 426 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 BBS4Q96RK4 519 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ANGPTL4Q9BY76 406 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 C20orf27Q9GZN8 174 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 PFDN4Q9NQP4 134 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 GIMAP4Q9NUV9 329 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 PRODH2Q9UF12 536 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 GIMAP2Q9UG22 337 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 BAIAP2L1Q9UHR4 511 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 CBLCQ9ULV8 474 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ACTL7BQ9Y614 415 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 RAI1Q7Z5J4 1906 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-212ENST00000528930 ARHGAP21Q5T5U3 1957 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 DSCAMO60469 2012 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.18
SSBP3-212ENST00000528930 A0A087WV62 115 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 ATP6AP2A0A1C7CYW4 349 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 FRG2CA6NGY1 282 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 UPK1AO00322 258 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PLOD2O00469 737 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PRRG2O14669 202 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 ACOX3O15254 700 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 TM9SF1O15321 606 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 BIRC5O15392 142 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 MGRN1O60291 552 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 UGT2B11O75310 529 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 LYPLA1O75608 230 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PPM1BO75688 479 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 ATP6AP2O75787 350 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PSMG1O95456 288 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CHEK2O96017 543 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 LSP1P33241 339 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 THBS2P35442 1172 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 MDH1P40925 334 aaKnown RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CASP3P42574 277 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 FRKP42685 505 aaPredicted RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 TMED10P49755 219 aaKnown RBP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 NCBP2P52298 156 aaKnown RBP eCLIP7.7□□□□□ -1.18
SSBP3-212ENST00000528930 KCNJ2P63252 427 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PSG6Q00889 435 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PDE7AQ13946 482 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 SLC10A1Q14973 349 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CHRFAM7AQ494W8 412 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 GALNTL6Q49A17 601 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 GXYLT1Q4G148 440 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 ANKRD26P1Q6NSI1 321 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 PAOXQ6QHF9 649 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 TRILQ7L0X0 811 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 NUP54Q7Z3B4 507 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 CROCCP2Q86T23 111 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 DDIASQ8IXT1 998 aa7.7□□□□□ -1.18
SSBP3-212ENST00000528930 AGR3Q8TD06 166 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms