RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FCGR1BQ92637 280 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 OSTF1Q92882 214 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MAP3K3Q99759 626 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MAGT1Q9H0U3 335 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 SNX25Q9H3E2 840 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ZFP14Q9HCL3 533 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 YAE1D1Q9NRH1 226 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 MRPL17Q9NRX2 175 aaKnown RBP4.98□□□□□ -1.61
PCF11-202ENST00000528336 GPR173Q9NS66 373 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CHMP2BQ9UQN3 213 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ZNF510Q9Y2H8 683 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 SLCO1B1Q9Y6L6 691 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 CASZ1Q86V15 1759 aa4.98□□□□□ -1.61
PCF11-202ENST00000528336 ABCC4O15439 1325 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 MAP3K15Q6ZN16 1313 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 TUBGCP6Q96RT7 1819 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 TRBV5-5A0A0J9YX44 114 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 A0A0J9YYE9 177 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 A0A1W2PPW3 197 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 BTBD17A6NE02 478 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ANKRD30BLA7E2S9 258 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 A8MUI8 341 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ZNF208O43345 1280 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 FCMRO60667 390 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 SDC3O75056 442 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 LRP3O75074 770 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 OR4F21O95013 312 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 TRBC1P01850 177 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 PRKAR1AP10644 381 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 PRPS2P11908 318 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 GP1BBP13224 206 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 FOSL2P15408 326 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 PIK3R1P27986 724 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 NSFP46459 744 aaKnown RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 OR3A1P47881 315 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 PPT1P50897 306 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 MTCP1P56278 107 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 CNTN2Q02246 1040 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 SLC34A1Q06495 639 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 RABGAP1LQ5R372 815 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 AGBL2Q5U5Z8 902 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 AGAP6Q5VW22 663 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 CLEC6AQ6EIG7 209 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 BTNL8Q6UX41 500 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 IL17RELQ6ZVW7 336 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 COPS6Q7L5N1 327 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 FAM131BQ86XD5 332 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 MEX3DQ86XN8 651 aaKnown RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 KATNAL2Q8IYT4 538 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 SIDT2Q8NBJ9 832 aaKnown RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 SPATA4Q8NEY3 305 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 OR6S1Q8NH40 331 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 DDI1Q8WTU0 396 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 TSACCQ96A04 125 aaPredicted RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 MCUR1Q96AQ8 359 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ZNF707Q96C28 371 aaPredicted RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 HAVCR1Q96D42 359 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 MTMR9Q96QG7 549 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 PANX2Q96RD6 677 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 LPAR4Q99677 370 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 C17orf62Q9BQA9 187 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ALKBH7Q9BT30 221 aaPredicted RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 TRIM62Q9BVG3 475 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 DNTTIP1Q9H147 329 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 SLC26A1Q9H2B4 701 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ZDHHC6Q9H6R6 413 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 CALHM2Q9HA72 323 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ONECUT1Q9UBC0 465 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 MTRF1LQ9UGC7 380 aaKnown RBP4.97□□□□□ -1.61
PCF11-202ENST00000528336 SH3GLB1Q9Y371 365 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 SNED1Q8TER0 1413 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 ATP10DQ9P241 1426 aa4.97□□□□□ -1.61
PCF11-202ENST00000528336 A0A1W2PR80 420 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 TMEM89A2RUT3 159 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 C15orf61A6NNL5 157 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 TMCO5BA8MYB1 307 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 ZNF701M0R085 212 aaPredicted RBP4.96□□□□□ -1.62
PCF11-202ENST00000528336 POLR1CO15160 346 aaPredicted RBP4.96□□□□□ -1.62
PCF11-202ENST00000528336 NME2P1O60361 137 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 PRAF2O60831 178 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CDH16O75309 829 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 ATP6V1G1O75348 118 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 SNAI1O95863 264 aaPredicted RBP4.96□□□□□ -1.62
PCF11-202ENST00000528336 VTNP04004 478 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 ATP1B1P05026 303 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 STAG3L1P0CL83 205 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 RRASP10301 218 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 DPEP1P16444 411 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CYP2B6P20813 491 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 DPP4P27487 766 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 OR1D2P34982 312 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 MMP12P39900 470 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 ALDH3B1P43353 468 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 HAAOP46952 286 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 FNTAP49354 379 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 NUMBP49757 651 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CCZ1BP86790 482 aa4.96□□□□□ -1.62
PCF11-202ENST00000528336 CCZ1P86791 482 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms