RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 RTL3Q8N8U3 475 aaKnown RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 AQP11Q8NBQ7 271 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 OR2T35Q8NGX2 323 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 PHOSPHO1Q8TCT1 267 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 RSC1A1Q92681 617 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 TNFRSF14Q92956 283 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 CASD1Q96PB1 797 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 THAP7Q9BT49 309 aaPredicted RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 SEBOXQ9HB31 216 aaPredicted RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 GJD2Q9UKL4 321 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 UBQLN1Q9UMX0 589 aaKnown RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 C19orf53Q9UNZ5 99 aaPredicted RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 NPTNQ9Y639 398 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 G3V3Q6 166 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 FFAR2O15552 330 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 TGM5O43548 720 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 SSNA1O43805 119 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 LANCL1O43813 399 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 LRATO95237 230 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 PRAMEF12O95522 483 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 RAB36O95755 333 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 APOC3P02656 99 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 VTNP04004 478 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 TCRBP04435 133 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 C6P13671 934 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 CTPS1P17812 591 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 TNFRSF1BP20333 461 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 TACR3P29371 465 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 AQP1P29972 269 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 FGF9P31371 208 aaPredicted RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 PBX3P40426 434 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 KCNJ3P48549 501 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 IFI44LQ53G44 452 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 OXLD1Q5BKU9 147 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 CTSL3PQ5NE16 218 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 SPOUT1Q5T280 376 aaKnown RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 RIPPLY2Q5TAB7 128 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 C1orf94Q6P1W5 598 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 SLC27A1Q6PCB7 646 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 TMEM91Q6ZNR0 172 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 OTOP2Q7RTS6 562 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 EIF4E3Q8N5X7 224 aaKnown RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 MDGA1Q8NFP4 955 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 ARRDC2Q8TBH0 407 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 OTULINQ96BN8 352 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 MS4A3Q96HJ5 214 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 ZNF514Q96K75 400 aaPredicted RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 RHOVQ96L33 236 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 ZFP42Q96MM3 310 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 HHIPQ96QV1 700 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 SMOQ99835 787 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 THSD1Q9NS62 852 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 C14orf105Q9NVL8 296 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 NLE1Q9NVX2 485 aaPredicted RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 GHRLQ9UBU3 117 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 FBXL2Q9UKC9 423 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 ADAMTS5Q9UNA0 930 aa7.05□□□□□ -1.28
SOX6-208ENST00000527619 SF3B6Q9Y3B4 125 aaKnown RBP7.05□□□□□ -1.28
SOX6-208ENST00000527619 BTBD17A6NE02 478 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FAM74A7A6NL05 159 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ITGB1BP1O14713 200 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TAPBPO15533 448 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GPR39O43194 453 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 GLUD1P00367 558 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SOD1P00441 154 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 IFNA2P01563 188 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PIRTP0C851 137 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 EBLN1P0CF75 366 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 PEPDP12955 493 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SDC1P18827 310 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TACR1P25103 407 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TLX1P31314 330 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 GABRA5P31644 462 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 LIMS1P48059 325 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CSNK1DP48730 415 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 MTAPQ13126 283 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ILKQ13418 452 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ST3GAL2Q16842 350 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 FAM74A3Q4VXF1 159 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 RNF113BQ8IZP6 322 aaKnown RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 OR10H5Q8NGA6 315 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 OR5M1Q8NGP8 315 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 OR14C36Q8NHC7 312 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 COQ8AQ8NI60 647 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SLC6A18Q96N87 628 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 MYOZ2Q9NPC6 264 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TAS2R10Q9NYW0 307 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ING1Q9UK53 422 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 STARD10Q9Y365 291 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 ARRDC5A6NEK1 342 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 AHRRA9YTQ3 701 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 SNAPC5O75971 98 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 NCR1O76036 304 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 RGS11O94810 467 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 TOXO94900 526 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CPSF4O95639 269 aaKnown RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 GASTP01350 101 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 CRHP06850 196 aa7.04□□□□□ -1.28
SOX6-208ENST00000527619 HOXC4P09017 264 aaPredicted RBP7.04□□□□□ -1.28
SOX6-208ENST00000527619 ELK1P19419 428 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms