RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 UPK1AO00322 258 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 EIF1AYO14602 144 aaKnown RBP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 SS18L1O75177 396 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 ANGPTL1O95841 491 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 ANXA4P09525 319 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 DDCP20711 480 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 NCBP2P52298 156 aaKnown RBP eCLIP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 PSMD4P55036 377 aaKnown RBP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 UNC50Q53HI1 259 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 ZNF678Q5SXM1 525 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 TEX35Q5T0J7 233 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 HEPHL1Q6MZM0 1159 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 TMEM107Q6UX40 140 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 BEND4Q6ZU67 534 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 GPRIN3Q6ZVF9 776 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 WFDC8Q8IUA0 241 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 RELL1Q8IUW5 271 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 TBL1XR1Q9BZK7 514 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 OR10A4Q9H209 315 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 GLRX2Q9NS18 164 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 SIRT5Q9NXA8 310 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 PAQR5Q9NXK6 330 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 TAS2R7Q9NYW3 318 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 MCTS1Q9ULC4 181 aaKnown RBP14.42□□□□□ -0.1
PTPRU-210ENST00000527027 GRID1Q9ULK0 1009 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 GPR52Q9Y2T5 361 aa14.42□□□□□ -0.1
PTPRU-210ENST00000527027 SHISA8B8ZZ34 492 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 TRIM49D1C9J1S8 452 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 UTS2O95399 124 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 PSMG1O95456 288 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 TAC1P20366 129 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 HTR6P50406 440 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 RPS4XP62701 263 aaKnown RBP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 PRR5P85299 388 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 BTKQ06187 659 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 CKAP4Q07065 602 aaKnown RBP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 DMTNQ08495 405 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 C2orf80Q0P641 193 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 ZNHIT3Q15649 155 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 CLEC12BQ2HXU8 276 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 PRSS53Q2L4Q9 553 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 APOOLQ6UXV4 268 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 WDR75Q8IWA0 830 aaKnown RBP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 OR2L13Q8N349 312 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 OR10D3Q8NH80 312 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 AKAP1Q92667 903 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 LMF2Q9BU23 707 aaKnown RBP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 EBPLQ9BY08 206 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 ACTR6Q9GZN1 396 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 DDX18Q9NVP1 670 aaKnown RBP14.41□□□□□ -0.1
PTPRU-210ENST00000527027 LAMP3Q9UQV4 416 aa14.41□□□□□ -0.1
PTPRU-210ENST00000527027 RNF223E7ERA6 249 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 GMFGO60234 142 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 URI1O94763 535 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-210ENST00000527027 SYNGR4O95473 234 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ZNF17P17021 662 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 PSMB1P20618 241 aaKnown RBP14.4□□□□□ -0.1
PTPRU-210ENST00000527027 IDUAP35475 653 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 RFX3P48380 749 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 VEZF1Q14119 521 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ETFDHQ16134 617 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 CTU2Q2VPK5 515 aaKnown RBP14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ADAM5Q6NVV9 412 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ZNF572Q7Z3I7 529 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-210ENST00000527027 STK32CQ86UX6 486 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 MAPK1IP1LQ8NDC0 245 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ELP4Q96EB1 424 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 TRMT61AQ96FX7 289 aaKnown RBP14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ADGRG7Q96K78 797 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 GLIPR2Q9H4G4 154 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 C3orf14Q9HBI5 128 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 ZNF180Q9UJW8 692 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 VDAC3Q9Y277 283 aa14.4□□□□□ -0.1
PTPRU-210ENST00000527027 PCNX3Q9H6A9 2034 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 A0A087WZY1 265 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 SERTM1A2A2V5 107 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 CCDC151A5D8V7 595 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 TTC36A6NLP5 189 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 OVOL3O00110 214 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 ADAMDEC1O15204 470 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 CXCL13O43927 109 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 DLX3O60479 287 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 KCNH1O95259 989 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 IMPDH1P20839 514 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 GABRA3P34903 492 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 PKNOX1P55347 436 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 ZNF763Q0D2J5 394 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 WHAMMP3Q1A5X7 153 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 SPDYAQ5MJ70 313 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 CPTPQ5TA50 214 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 FAM71E1Q6IPT2 247 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 GTPBP8Q8N3Z3 284 aaPredicted RBP14.39□□□□□ -0.11
PTPRU-210ENST00000527027 MNS1Q8NEH6 495 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 STEAP2Q8NFT2 490 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 CDC26Q8NHZ8 85 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 DCAKDQ8WVC6 231 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 AMDHD1Q96NU7 426 aa14.39□□□□□ -0.11
PTPRU-210ENST00000527027 TMEM237Q96Q45 408 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms