RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 IRX1P78414 480 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 GAB1Q13480 694 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 RPS6KA2Q15349 733 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 DPY19L1Q2PZI1 675 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 GTDC1Q4AE62 458 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 GXYLT1Q4G148 440 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 AGKQ53H12 422 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 PIGGQ5H8A4 983 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 SLC2A7Q6PXP3 512 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 DLEU7Q6UYE1 221 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 NPSR1Q6W5P4 371 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 HSDL2Q6YN16 418 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 GK5Q6ZS86 529 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 WDR53Q7Z5U6 358 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 CPLX4Q7Z7G2 160 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 NUBPLQ8TB37 319 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 LRRC46Q96FV0 321 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 OR52E6Q96RD3 313 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 PRPF18Q99633 342 aaKnown RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 DEFB126Q9BYW3 111 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 PAIP1Q9H074 479 aaKnown RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 NXF5Q9H1B4 397 aaKnown RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 PNPLA3Q9NST1 481 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 GIMAP4Q9NUV9 329 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 ATAD3AQ9NVI7 634 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 FAM120CQ9NX05 1096 aaKnown RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 TAS2R9Q9NYW1 312 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 ARMCX1Q9P291 453 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 MYOTQ9UBF9 498 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 FOXD3Q9UJU5 478 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 GPR55Q9Y2T6 319 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-204ENST00000526430 PRAMEF27A3QJZ7 478 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 OR6C76A6NM76 312 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 CAPN14A8MX76 684 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 WWP2O00308 870 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 FCHO1O14526 889 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 BCKDKO14874 412 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 EMC8O43402 210 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 OR2J2O76002 312 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 CPSF4O95639 269 aaKnown RBP9.96□□□□□ -0.82
NEDD8-204ENST00000526430 GSNP06396 782 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 ACP2P11117 423 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 DRD5P21918 477 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 NTSP30990 170 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 UQCRC1P31930 480 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 TRHRP34981 398 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-204ENST00000526430 ADH7P40394 386 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 CCT3P49368 545 aaKnown RBP9.96□□□□□ -0.82
NEDD8-204ENST00000526430 CORO7P57737 925 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 TIGD2Q4W5G0 525 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 LRIF1Q5T3J3 769 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 ANXA8L1Q5VT79 327 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 RTL6Q6ICC9 239 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 TMEM64Q6YI46 380 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 RNF111Q6ZNA4 994 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 MTDHQ86UE4 582 aaKnown RBP9.96□□□□□ -0.82
NEDD8-204ENST00000526430 SULF2Q8IWU5 870 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 C10orf111Q8N326 155 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 OR4N2Q8NGD1 307 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 RNASE6Q93091 150 aaKnown RBP9.96□□□□□ -0.82
NEDD8-204ENST00000526430 TP53INP1Q96A56 240 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 SPDL1Q96EA4 605 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 LMF2Q9BU23 707 aaKnown RBP9.96□□□□□ -0.82
NEDD8-204ENST00000526430 ITPAQ9BY32 194 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 WWTR1Q9GZV5 400 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 FOLH1BQ9HBA9 442 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 BCAP29Q9UHQ4 241 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 TRIM33Q9UPN9 1127 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 KCNE3Q9Y6H6 103 aa9.96□□□□□ -0.82
NEDD8-204ENST00000526430 EXPH5Q8NEV8 1989 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 C2orf92A0A1B0GVN3 265 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 A0A1W2PP18 115 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 CCDC154A6NI56 674 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 CLCA1A8K7I4 914 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 HAX1O00165 279 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 TO15178 435 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 SMPD2O60906 423 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ITGA10O75578 1167 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 SLITRK5O94991 958 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 HMGN2P05204 90 aaKnown RBP9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ZCCHC18P0CG32 403 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 RFC3P40938 356 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 PPICP45877 212 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ASCL1P50553 236 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 HLCSP50747 726 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 ZNF791Q3KP31 576 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-204ENST00000526430 RIPPLY2Q5TAB7 128 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 SAXO2Q658L1 398 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 MFSD12Q6NUT3 480 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 MSANTD1Q6ZTZ1 278 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 C6orf120Q7Z4R8 191 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 YTHDF3Q7Z739 585 aaKnown RBP9.95□□□□□ -0.82
NEDD8-204ENST00000526430 DPP10Q8N608 796 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 SLC16A11Q8NCK7 471 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 C17orf47Q8NEP4 570 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 NUP43Q8NFH3 380 aa9.95□□□□□ -0.82
NEDD8-204ENST00000526430 OR52N2Q8NGI0 321 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms