RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CSNK1A1LQ8N752 337 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF709Q8N972 641 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 OR6M1Q8NGM8 313 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 OR2L8Q8NGY9 312 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 C7orf33Q8WU49 177 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 GGHQ92820 318 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 BCL2L2Q92843 193 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 PTP4A1Q93096 173 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 C5orf30Q96GV9 206 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 RUFY1Q96T51 708 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 DDX50Q9BQ39 737 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 RIOK1Q9BRS2 568 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 SPXQ9BT56 116 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 NACA2Q9H009 215 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 TSPYL1Q9H0U9 437 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 TRPV6Q9H1D0 765 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM245Q9H330 911 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 THAP9Q9H5L6 903 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 NARFLQ9H6Q4 476 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 MAGEF1Q9HAY2 307 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 HOMER3Q9NSC5 361 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ZCCHC3Q9NUD5 404 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ACOXLQ9NUZ1 547 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 CNIH4Q9P003 139 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 HMG20BQ9P0W2 317 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ONECUT1Q9UBC0 465 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 IL19Q9UHD0 177 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 NARFQ9UHQ1 456 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF225Q9UK10 706 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 MRTO4Q9UKD2 239 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 TBX21Q9UL17 535 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 PRPF19Q9UMS4 504 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 SMC3Q9UQE7 1217 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 FOXA2Q9Y261 457 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 WIF1Q9Y5W5 379 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 SYNJ2O15056 1496 aa1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 SPAG9O60271 1321 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-219ENST00000526299 A0A096LNJ9 63 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 BICDL2A1A5D9 508 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 NKX2-6A6NCS4 301 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 DHRS7CA6NNS2 312 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC28A1O00337 649 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 MPHOSPH10O00566 681 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 AIREO43918 545 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 B4GALT2O60909 372 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 RBBP9O75884 186 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 APRTP07741 180 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ABHD2P08910 425 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 AREGP15514 252 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CYP3A5P20815 502 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 NSFP46459 744 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ASMTP46597 345 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 KCNJ1P48048 391 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 SERPINH1P50454 418 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 TNFSF10P50591 281 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 GALK2Q01415 458 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 OTUD4Q01804 1114 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 MEF2BQ02080 365 aaPredicted RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 GFPT1Q06210 699 aaPredicted RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 AP1B1Q10567 949 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 WASHC5Q12768 1159 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CBX3Q13185 183 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 LASP1Q14847 261 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 SHROOM1Q2M3G4 852 aaPredicted RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CHRFAM7AQ494W8 412 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 MPPE1Q53F39 396 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CCDC92Q53HC0 331 aaPredicted RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 HSP90AA5PQ58FG0 334 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 PRAMEF8Q5VWM4 474 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 OR5M10Q6IEU7 315 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CNSTQ6PJW8 725 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CXCL17Q6UXB2 119 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ASRGL1Q7L266 308 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 PRSS42Q7Z5A4 293 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF410Q86VK4 478 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 VPS36Q86VN1 386 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 KDM8Q8N371 416 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 HDDC3Q8N4P3 179 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 OR4L1Q8NH43 312 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 RDH11Q8TC12 318 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ST7LQ8TDW4 575 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC13A3Q8WWT9 602 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 KRT35Q92764 455 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 PINX1Q96BK5 328 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 DNAJA3Q96EY1 480 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CABS1Q96KC9 395 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 RPGRIP1Q96KN7 1286 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 NSMCE2Q96MF7 247 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 CPXM1Q96SM3 734 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ATP6V0BQ99437 205 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ATG10Q9H0Y0 220 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ABCG4Q9H172 646 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC26A1Q9H2B4 701 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 GANQ9H2C0 597 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 POLD4Q9HCU8 107 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 ERVK-18Q9QC07 812 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 EXOC7Q9UPT5 735 aa1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 TDRKHQ9Y2W6 561 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 MRPS2Q9Y399 296 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-219ENST00000526299 KIF3AQ9Y496 699 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms