RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SPRY3O43610 288 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 ITM2AO43736 263 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OR4F21O95013 312 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 ZBTB11O95625 1053 aaPredicted RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 CPNE6O95741 557 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OTCP00480 354 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 LCATP04180 440 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 RPLP0P05388 317 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 FGF4P08620 206 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 VIMP08670 466 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 RPS17P08708 135 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 UGT2B7P16662 529 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TSPAN8P19075 237 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 CSRP1P21291 193 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 CDH3P22223 829 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PSMB5P28074 263 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PEBP1P30086 187 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 RPL14P50914 215 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 CCR8P51685 355 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 CCR9P51686 369 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PPP5CP53041 499 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 CDH12P55289 794 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PKNOX1P55347 436 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 ERVPABLB-1P60509 514 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TBPL1P62380 186 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 IL1RL1Q01638 556 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 BST1Q10588 318 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 LCP2Q13094 533 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 CHIT1Q13231 466 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 DOC2AQ14183 400 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 RCN2Q14257 317 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 NAA25Q14CX7 972 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 RBBP5Q15291 538 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 SLC5A12Q1EHB4 618 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 KRTCAP3Q53RY4 240 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PAGE2BQ5JRK9 111 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 LIPJQ5W064 366 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 ATG9BQ674R7 924 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TTC19Q6DKK2 380 aaPredicted RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 MED27Q6P2C8 311 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 FIGLAQ6QHK4 219 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 SPESP1Q6UW49 350 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 FAM92BQ6ZTR7 304 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 GPRIN3Q6ZVF9 776 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 RPS27LQ71UM5 84 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 GOLGA7Q7Z5G4 137 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 R3HCC1LQ7Z5L2 792 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 ADCK2Q7Z695 626 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 GLRX5Q86SX6 157 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 CLYBLQ8N0X4 340 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 LSMEM2Q8N112 164 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 GHDCQ8N2G8 530 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TBC1D19Q8N5T2 526 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 DEFB124Q8NES8 71 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OR2L3Q8NG85 312 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OR4F6Q8NGB9 312 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OR4K1Q8NGD4 311 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 OR4D9Q8NGE8 314 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 FLVCR1-AS1Q8TAF5 88 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 METTL6Q8TCB7 284 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 NEIL2Q969S2 332 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 UBE2E3Q969T4 207 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 WDR34Q96EX3 536 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 THOC3Q96J01 351 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 GFM1Q96RP9 751 aaKnown RBP4.18□□□□□ -1.74
USP48-211ENST00000526044 CD180Q99467 661 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 MAP3K3Q99759 626 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 AIF1LQ9BQI0 150 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 TMEM204Q9BSN7 226 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PITPNM3Q9BZ71 974 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 SHCBP1LQ9BZQ2 653 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 HIPK2Q9H2X6 1198 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 SYNDIG1Q9H7V2 258 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PELI2Q9HAT8 420 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 MID1IP1Q9NPA3 183 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 NLKQ9UBE8 527 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 ZDHHC2Q9UIJ5 367 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PCTPQ9UKL6 214 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 POMT2Q9UKY4 750 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 KLHL20Q9Y2M5 609 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 RNF11Q9Y3C5 154 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 PCDHGA1Q9Y5H4 931 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 UNC13CQ8NB66 2214 aa4.18□□□□□ -1.74
USP48-211ENST00000526044 KNL1Q8NG31 2342 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 USP34Q70CQ2 3546 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 KCNE1BA0A087WTH5 132 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 IGHV5-51A0A0C4DH38 117 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 IGHV5-10-1A0A0J9YXX1 117 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 A0A1W2PQM1 296 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 FEZF1A0PJY2 475 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 GMNCA6NCL1 334 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TLCD2A6NGC4 264 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ANKDD1BA6NHY2 528 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 INAFM1C9JVW0 142 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 SLCO1B7G3V0H7 640 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TMX2-CTNND1H3BSU7 103 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PLOD2O00469 737 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PEX12O00623 359 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms