RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RPA1P27694 616 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 UGT1A3P35503 534 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 KRT6CP48668 564 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 DIO3P55073 304 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 LIM2P55344 173 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 RFTN1Q14699 578 aaPredicted RBP2.99□□□□□ -1.93
CD44-215ENST00000525241 DCST2Q5T1A1 773 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 CYS1Q717R9 158 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 HSD11B1LQ7Z5J1 315 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 IFNEQ86WN2 208 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 ZNF619Q8N2I2 560 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 CERS5Q8N5B7 392 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 C14orf178Q8N769 122 aaPredicted RBP2.99□□□□□ -1.93
CD44-215ENST00000525241 BCORP1Q8N888 145 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 ARL10Q8N8L6 244 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 OR9A4Q8NGU2 314 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 FRAT1Q92837 279 aaPredicted RBP2.99□□□□□ -1.93
CD44-215ENST00000525241 C16orf74Q96GX8 76 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 HSD3B7Q9H2F3 369 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 Q9H3A6 140 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 LPAR2Q9HBW0 351 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 YAE1D1Q9NRH1 226 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 C1orf123Q9NWV4 160 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 UTP6Q9NYH9 597 aaKnown RBP2.99□□□□□ -1.93
CD44-215ENST00000525241 FOXJ3Q9UPW0 622 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 PIN4Q9Y237 131 aaKnown RBP2.99□□□□□ -1.93
CD44-215ENST00000525241 PRRC2AP48634 2157 aaKnown RBP2.99□□□□□ -1.93
CD44-215ENST00000525241 CCDC7Q96M83 1385 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 ANKRD30BQ9BXX2 1392 aa2.99□□□□□ -1.93
CD44-215ENST00000525241 COL16A1Q07092 1604 aaPredicted RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 LRRC30A6NM36 301 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 WASHC1A8K0Z3 465 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 WASH3PC4AMC7 463 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 H0Y9J4 135 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 RASGRF2O14827 1237 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 TRIM3O75382 744 aaPredicted RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 RRASP10301 218 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 CPN1P15169 458 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 OR3A4PP47883 348 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 TRPC1P48995 793 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 RND3P61587 244 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 RPL8P62917 257 aaKnown RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 CEBPEQ15744 281 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 ADPRMQ3LIE5 342 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 OR2B11Q5JQS5 317 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 IRGCQ6NXR0 463 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 CXCL17Q6UXB2 119 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 WASH2PQ6VEQ5 465 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 TFAP2EQ6VUC0 442 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 RBM43Q6ZSC3 357 aaKnown RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 TRPM8Q7Z2W7 1104 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 SERPINA9Q86WD7 417 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 EFCAB13Q8IY85 973 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 UPRTQ96BW1 309 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 DHTKD1Q96HY7 919 aaPredicted RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 VPS39Q96JC1 886 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 NOL4LQ96MY1 436 aaPredicted RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 FAM111AQ96PZ2 611 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 SLC25A51Q9H1U9 297 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 EHD1Q9H4M9 534 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 ACTR8Q9H981 624 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 ISG20L2Q9H9L3 353 aaKnown RBP2.98□□□□□ -1.93
CD44-215ENST00000525241 ADAM22Q9P0K1 906 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 ANKMY1Q9P2S6 941 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 GPRASP1Q5JY77 1395 aa2.98□□□□□ -1.93
CD44-215ENST00000525241 FAM230AA0A1W2PPH8 454 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 FAM231BA6NCW3 169 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 TOM1L1O75674 476 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 CABYRO75952 493 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 PTBP3O95758 552 aaKnown RBP2.97□□□□□ -1.93
CD44-215ENST00000525241 BCKDHAP12694 445 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 UQCRBP14927 111 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 H2AFXP16104 143 aaPredicted RBP2.97□□□□□ -1.93
CD44-215ENST00000525241 GAP43P17677 238 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 CCNA2P20248 432 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 IL10P22301 178 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 DNAJB1P25685 340 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 STARP49675 285 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 NOVA1P51513 510 aaKnown RBP2.97□□□□□ -1.93
CD44-215ENST00000525241 RPS8P62241 208 aaKnown RBP2.97□□□□□ -1.93
CD44-215ENST00000525241 VLDLRP98155 873 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 C2orf83Q53S99 150 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 METTL11BQ5VVY1 283 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 WSCD1Q658N2 575 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 RAET1GQ6H3X3 334 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 ZCCHC12Q6PEW1 402 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 SCARA5Q6ZMJ2 495 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 STKLD1Q8NE28 680 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 OR8H1Q8NGG4 311 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 OR52B4Q8NGK2 314 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 PSMG2Q969U7 264 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 HAVCR1Q96D42 359 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 VSTM2LQ96N03 204 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 TESK2Q96S53 571 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 FEM1AQ9BSK4 669 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 NFKBIZQ9BYH8 718 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 CCSER1Q9C0I3 900 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 COG4Q9H9E3 785 aa2.97□□□□□ -1.93
CD44-215ENST00000525241 RBM28Q9NW13 759 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms