RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 GRAMD2AQ8IUY3 354 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 UBQLNLQ8IYU4 475 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 WNT2BQ93097 391 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 GIMAP5Q96F15 307 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 OTUB1Q96FW1 271 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-203ENST00000525013 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
CAPN1-203ENST00000525013 SH3GL2Q99962 352 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 ZNF395Q9H8N7 513 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-203ENST00000525013 KCNK9Q9NPC2 374 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 ZCCHC3Q9NUD5 404 aaKnown RBP16.8■□□□□ 0.28
CAPN1-203ENST00000525013 ATAD3AQ9NVI7 634 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 EIF3LQ9Y262 564 aaKnown RBP16.8■□□□□ 0.28
CAPN1-203ENST00000525013 F8P00451 2351 aa16.8■□□□□ 0.28
CAPN1-203ENST00000525013 ESPNB1AK53 854 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 ITM2AO43736 263 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 ANGPTL1O95841 491 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 IL18BPO95998 194 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 SERPINE1P05121 402 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 PEPDP12955 493 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 PEX19P40855 299 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 MAP3K8P41279 467 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 C17orf67Q0P5P2 114 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 FOXF2Q12947 444 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 GANABQ14697 944 aaKnown RBP16.79■□□□□ 0.28
CAPN1-203ENST00000525013 MLC1Q15049 377 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 PDCD2Q16342 344 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-203ENST00000525013 DUSP5Q16690 384 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 APOOLQ6UXV4 268 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 KRTCAP2Q8N6L1 136 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 COX18Q8N8Q8 333 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 OR5M1Q8NGP8 315 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 NUDT8Q8WV74 236 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 HOXB13Q92826 284 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-203ENST00000525013 INTS12Q96CB8 462 aaKnown RBP16.79■□□□□ 0.28
CAPN1-203ENST00000525013 FAM120BQ96EK7 910 aaKnown RBP16.79■□□□□ 0.28
CAPN1-203ENST00000525013 C1GALT1C1Q96EU7 318 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 PPP1R36Q96LQ0 422 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 G6PC3Q9BUM1 346 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 RAB21Q9UL25 225 aa16.79■□□□□ 0.28
CAPN1-203ENST00000525013 TM9SF1O15321 606 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 BIRC5O15392 142 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 KCNK2O95069 426 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 RCBTB2O95199 551 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 PRPS1L1P21108 318 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 PRIM2P49643 509 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ABCE1P61221 599 aaKnown RBP16.78■□□□□ 0.28
CAPN1-203ENST00000525013 BCL2A1Q16548 175 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 LSM12Q3MHD2 195 aaKnown RBP16.78■□□□□ 0.28
CAPN1-203ENST00000525013 FBXL19-AS1Q494R0 122 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 SPDYE7PQ495Y7 208 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ZCCHC12Q6PEW1 402 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 P4HA3Q7Z4N8 544 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ADGRE4PQ86SQ3 457 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 GCNT2Q8N0V5 402 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 MEIOBQ8N635 442 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ZNF781Q8N8C0 355 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 OR4C3Q8NH37 302 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ZFP3Q96NJ6 502 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ZIM3Q96PE6 472 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 UCN2Q96RP3 112 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 SSU72Q9NP77 194 aaKnown RBP16.78■□□□□ 0.28
CAPN1-203ENST00000525013 SIRT3Q9NTG7 399 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-203ENST00000525013 CRIM1Q9NZV1 1036 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 CLCF1Q9UBD9 225 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 FOXD3Q9UJU5 478 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-203ENST00000525013 ZNF337Q9Y3M9 751 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 CELSR1Q9NYQ6 3014 aa16.78■□□□□ 0.28
CAPN1-203ENST00000525013 OR2M5A3KFT3 312 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 H3BML4 177 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 CFLARO15519 480 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 SEC14L5O43304 696 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 NDUFB5O43674 189 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 C6orf47O95873 294 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 HMGN2P05204 90 aaKnown RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 G6PDP11413 515 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 HPGDP15428 266 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 TBXA2RP21731 343 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 CCT3P49368 545 aaKnown RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 DIO3P55073 304 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 POU6F2P78424 691 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 MAD2L1Q13257 205 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 TP53BP2Q13625 1128 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 LASP1Q14847 261 aaKnown RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 PGS1Q32NB8 556 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 ZAR1Q86SH2 424 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 KIF18BQ86Y91 864 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 GATSQ8NAP1 163 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 GOT1L1Q8NHS2 421 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 OR5P2Q8WZ92 322 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 PAIP2Q9BPZ3 127 aaKnown RBP16.77■□□□□ 0.28
CAPN1-203ENST00000525013 PIGQQ9BRB3 760 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 SFXN3Q9BWM7 321 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 BTBD2Q9BX70 525 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 ACBD3Q9H3P7 528 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 FBXO34Q9NWN3 711 aa16.77■□□□□ 0.28
CAPN1-203ENST00000525013 SLC22A20A6NK97 555 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 ALG1L2C9J202 215 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 LINC01387J3KSC0 135 aa16.76■□□□□ 0.27
CAPN1-203ENST00000525013 OXSR1O95747 527 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-203ENST00000525013 TGM6O95932 706 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 423.8 ms