RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ARRB1P49407 418 aaPredicted RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 ARL4DP49703 201 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 CDK5Q00535 292 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ID2Q02363 134 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ZNF91Q05481 1191 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 PIGFQ07326 219 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 FUT7Q11130 342 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ST3GAL4Q11206 333 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 SLC13A2Q13183 592 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 NCF4Q15080 339 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 CCDC85BQ15834 202 aaPredicted RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 ZNF141Q15928 474 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 CTF1Q16619 201 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.93□□□□□ -1.3
CASP4-204ENST00000524843 PGGHGQ32M88 737 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 MINDY4Q4G0A6 757 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 FLYWCH1Q4VC44 716 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 KLHL22Q53GT1 634 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 TRMT12Q53H54 448 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 C3orf38Q5JPI3 329 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ARMC4Q5T2S8 1044 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 MRPL2Q5T653 305 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 ZNF620Q6ZNG0 422 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 GDPGP1Q6ZNW5 385 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 Q6ZPB1 254 aaPredicted RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 QSOX2Q6ZRP7 698 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 USP43Q70EL4 1123 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 DGLUCYQ7Z3D6 616 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 SLC46A3Q7Z3Q1 461 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 GDF7Q7Z4P5 450 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ZER1Q7Z7L7 766 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 GID4Q8IVV7 300 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 SLITRK4Q8IW52 837 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 OR4N5Q8IXE1 308 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 TMEM52Q8NDY8 209 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 B3GNT7Q8NFL0 401 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 OR52R1Q8NGF1 315 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 OR5T3Q8NGG3 340 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 OR52L1Q8NGH7 329 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 OR9Q1Q8NGQ5 310 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 TMEM163Q8TC26 289 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 BRIX1Q8TDN6 353 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 GPR151Q8TDV0 419 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 RIT1Q92963 219 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 RFKQ969G6 155 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 RBM18Q96H35 190 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 VSTM2LQ96N03 204 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 LRFN5Q96NI6 719 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 DUSP23Q9BVJ7 150 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 MND1Q9BWT6 205 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 RSPO3Q9BXY4 272 aaPredicted RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 TRIM2Q9C040 744 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 HOXD1Q9GZZ0 328 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 NAA50Q9GZZ1 169 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 TMEM27Q9HBJ8 222 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ISYNA1Q9NPH2 558 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 SEMA4GQ9NTN9 838 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 TBC1D23Q9NUY8 699 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 MRPS18AQ9NVS2 196 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 IRAK4Q9NWZ3 460 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 CCDC59Q9P031 241 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 SEC14L4Q9UDX3 406 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 MRTO4Q9UKD2 239 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.93□□□□□ -1.3
CASP4-204ENST00000524843 DIMT1Q9UNQ2 313 aaKnown RBP6.93□□□□□ -1.3
CASP4-204ENST00000524843 SRPK3Q9UPE1 567 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 BAIAP2Q9UQB8 552 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 ERGIC3Q9Y282 383 aa6.93□□□□□ -1.3
CASP4-204ENST00000524843 TNRC6BQ9UPQ9 1833 aaKnown RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 ADAMTS20P59510 1910 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 THADAQ6YHU6 1953 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 IGHV1OR21-1A0A087WYE8 117 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 A0A0A6YYC8 382 aaPredicted RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 EFCAB7A8K855 629 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 KDM4EB2RXH2 506 aaPredicted RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 I3L1I5 382 aaPredicted RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 K7ESF4 209 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 MYL12BO14950 172 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 POLR1CO15160 346 aaPredicted RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 CHP2O43745 196 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 MAN1A2O60476 641 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 BCAS1O75363 584 aaPredicted RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 KCNK2O95069 426 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 RAB36O95755 333 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 IGF2P01344 180 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 CT62P0C5K7 136 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 DBTP11182 482 aaKnown RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 CD36P16671 472 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 MYL12AP19105 171 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 TNNI3P19429 210 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 GABRA3P34903 492 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 GRK5P34947 590 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 PTGER1P34995 402 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 CAPZA2P47755 286 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 GIPRP48546 466 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 PPM1FP49593 454 aaPredicted RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 CLK1P49759 484 aaKnown RBP6.92□□□□□ -1.3
CASP4-204ENST00000524843 ZNF136P52737 540 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 NUDT6P53370 316 aa6.92□□□□□ -1.3
CASP4-204ENST00000524843 DCAF7P61962 342 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms