RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TMEM201Q5SNT2 666 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 SFRP5Q5T4F7 317 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 AGAP6Q5VW22 663 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 FRG2Q64ET8 278 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 FAM166AQ6J272 317 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 BHLHA15Q7RTS1 189 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 TUSC5Q8IXB3 177 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 METTL4Q8N3J2 472 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 OR7G2Q8NG99 324 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 OR10H5Q8NGA6 315 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 PYROXD1Q8WU10 500 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 ABHD3Q8WU67 409 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 HSD17B8Q92506 261 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 KISS1RQ969F8 398 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 ZNF775Q96BV0 537 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-211ENST00000523441 PHF21BQ96EK2 531 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 VSTM2LQ96N03 204 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 FRG2BQ96QU4 278 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 FAIM2Q9BWQ8 316 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 TBL1XR1Q9BZK7 514 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 ELOVL6Q9H5J4 265 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 TSC22D4Q9Y3Q8 395 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 SNX8Q9Y5X2 465 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 MEGF8Q7Z7M0 2845 aa10.34□□□□□ -0.75
SDCBP-211ENST00000523441 A0A0J9YW62 118 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ESYT3A0FGR9 886 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 SHISA9B4DS77 424 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 LINC01387J3KSC0 135 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 FADS1O60427 444 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 GCM2O75603 506 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ANGPTL1O95841 491 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 IL3P08700 152 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 SLC25A16P16260 332 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ITGA2P17301 1181 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 TSPAN8P19075 237 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 HNF1AP20823 631 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 USF1P22415 310 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 CFPP27918 469 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 SPRP35270 261 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ALDH18A1P54886 795 aaKnown RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 SPOCK1Q08629 439 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 WDR75Q8IWA0 830 aaKnown RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 PTGR2Q8N8N7 351 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 CDYL2Q8N8U2 506 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 L3MBTL4Q8NA19 623 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ATP6V1C2Q8NEY4 427 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 OR2V1Q8NHB1 315 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 PIWIL2Q8TC59 973 aaKnown RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ACTRT1Q8TDG2 376 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 OSTF1Q92882 214 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 SH3YL1Q96HL8 342 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 REXO5Q96IC2 774 aaKnown RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 RNF145Q96MT1 663 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ZNF681Q96N22 645 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 NSUN5Q96P11 429 aaKnown RBP10.33□□□□□ -0.76
SDCBP-211ENST00000523441 TMEM160Q9NX00 188 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 WHRNQ9P202 907 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 STOML1Q9UBI4 398 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 ADAM29Q9UKF5 820 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 PPP2R2CQ9Y2T4 447 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 SNX24Q9Y343 169 aa10.33□□□□□ -0.76
SDCBP-211ENST00000523441 IGHV3-15A0A0B4J1V0 119 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 A0A1W2PR80 420 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 TCRBV9S1A1TA0A576 114 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 UGDHO60701 494 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 BCAS2O75934 225 aaPredicted RBP10.32□□□□□ -0.76
SDCBP-211ENST00000523441 SEC31AO94979 1220 aaKnown RBP10.32□□□□□ -0.76
SDCBP-211ENST00000523441 UTS2O95399 124 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 IL33O95760 270 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 PDYNP01213 254 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 THBS1P07996 1170 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 IL11P20809 199 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 RNF144AP50876 292 aaPredicted RBP10.32□□□□□ -0.76
SDCBP-211ENST00000523441 FABP6P51161 128 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 CHRNEQ04844 493 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 GALNT1Q10472 559 aaPredicted RBP10.32□□□□□ -0.76
SDCBP-211ENST00000523441 PPA1Q15181 289 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 DECR1Q16698 335 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 UBAP2Q5T6F2 1119 aaKnown RBP10.32□□□□□ -0.76
SDCBP-211ENST00000523441 SLC22A25Q6T423 547 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 TFAP2EQ6VUC0 442 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 GABRG1Q8N1C3 465 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 FBXL14Q8N1E6 418 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 SLC35F6Q8N357 371 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 SELENOMQ8WWX9 145 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 BBS4Q96RK4 519 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 HDHD5Q9BXW7 423 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 OR10A4Q9H209 315 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 GIMAP4Q9NUV9 329 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 TAS2R9Q9NYW1 312 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 PRSS50Q9UI38 385 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 ACOT9Q9Y305 439 aa10.32□□□□□ -0.76
SDCBP-211ENST00000523441 GNG14A0A1W2PPG7 69 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 E7EQL1 145 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 RGS9O75916 674 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-211ENST00000523441 TGFAP01135 160 aa10.31□□□□□ -0.76
SDCBP-211ENST00000523441 JUNP05412 331 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms