RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MRTO4Q9UKD2 239 aaKnown RBP23.21■■□□□ 1.31
PVT1-219ENST00000523427 TIMM22Q9Y584 194 aa23.21■■□□□ 1.31
PVT1-219ENST00000523427 CHD3Q12873 2000 aaKnown RBP23.2■■□□□ 1.3
PVT1-219ENST00000523427 CLOCKO15516 846 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 CXCL13O43927 109 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 UTS2O95399 124 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 IL33O95760 270 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 GABRA3P34903 492 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 SERPINB9P50453 376 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 RPS4XP62701 263 aaKnown RBP23.2■■□□□ 1.3
PVT1-219ENST00000523427 ZNHIT3Q15649 155 aaPredicted RBP23.2■■□□□ 1.3
PVT1-219ENST00000523427 GLYR1Q49A26 553 aaPredicted RBP23.2■■□□□ 1.3
PVT1-219ENST00000523427 GALNT10Q86SR1 603 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 C1QTNF3Q9BXJ4 246 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 TMEM185BQ9H7F4 350 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 GRPEL1Q9HAV7 217 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 MIEF1Q9NQG6 463 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 STOML1Q9UBI4 398 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 NFU1Q9UMS0 254 aa23.2■■□□□ 1.3
PVT1-219ENST00000523427 C19orf53Q9UNZ5 99 aaPredicted RBP23.2■■□□□ 1.3
PVT1-219ENST00000523427 GXYLT2A0PJZ3 443 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 MYO1GB0I1T2 1018 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 UPK1AO00322 258 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 SYNGR4O95473 234 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 CASQ1P31415 396 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 C17orf67Q0P5P2 114 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.19■■□□□ 1.3
PVT1-219ENST00000523427 APOOLQ6UXV4 268 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 STK32CQ86UX6 486 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 TMEM151AQ8N4L1 468 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 GATSQ8NAP1 163 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 NANOS1Q8WY41 292 aaKnown RBP23.19■■□□□ 1.3
PVT1-219ENST00000523427 GTPBP3Q969Y2 492 aaKnown RBP23.19■■□□□ 1.3
PVT1-219ENST00000523427 KCNA7Q96RP8 456 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 ZNF382Q96SR6 550 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 NPAS1Q99742 590 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 FANCFQ9NPI8 374 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 EQTNQ9NQ60 294 aa23.19■■□□□ 1.3
PVT1-219ENST00000523427 MCTS1Q9ULC4 181 aaKnown RBP23.19■■□□□ 1.3
PVT1-219ENST00000523427 MXRA5Q9NR99 2828 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 A0A087WV62 115 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 SS18L1O75177 396 aaPredicted RBP23.18■■□□□ 1.3
PVT1-219ENST00000523427 TP53P04637 393 aaPredicted RBP23.18■■□□□ 1.3
PVT1-219ENST00000523427 TAC1P20366 129 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 DDCP20711 480 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 TSC22D1Q15714 1073 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 GRAMD1BQ3KR37 738 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 ZNF678Q5SXM1 525 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 BEND4Q6ZU67 534 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 WDR75Q8IWA0 830 aaKnown RBP23.18■■□□□ 1.3
PVT1-219ENST00000523427 PIK3R3Q92569 461 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 TMEM237Q96Q45 408 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 REG4Q9BYZ8 158 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 CDC42EP4Q9H3Q1 356 aaKnown RBP23.18■■□□□ 1.3
PVT1-219ENST00000523427 GLIPR2Q9H4G4 154 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 YAE1D1Q9NRH1 226 aa23.18■■□□□ 1.3
PVT1-219ENST00000523427 TNFSF11O14788 317 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 NDUFB5O43674 189 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 NTN1O95631 604 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 CDKN1AP38936 164 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 PSMD4P55036 377 aaKnown RBP23.17■■□□□ 1.3
PVT1-219ENST00000523427 TMEM44Q2T9K0 475 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 HEPHL1Q6MZM0 1159 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 C8orf74Q6P047 294 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 EXOC3L1Q86VI1 746 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 ZNF619Q8N2I2 560 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 TACO1Q9BSH4 297 aaKnown RBP23.17■■□□□ 1.3
PVT1-219ENST00000523427 TMEM204Q9BSN7 226 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 GPR52Q9Y2T5 361 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 ABCA1O95477 2261 aa23.17■■□□□ 1.3
PVT1-219ENST00000523427 DLX3O60479 287 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 IGKV1D-16P01601 117 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 NTSP30990 170 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 OCRLQ01968 901 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 ZNF844Q08AG5 666 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 MFSD12Q6NUT3 480 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 NEUROG1Q92886 237 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 S100PBPQ96BU1 408 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 ELP4Q96EB1 424 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 TRMT61AQ96FX7 289 aaKnown RBP23.16■■□□□ 1.3
PVT1-219ENST00000523427 TMEM216Q9P0N5 145 aa23.16■■□□□ 1.3
PVT1-219ENST00000523427 SOX30O94993 753 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 KCNH1O95259 989 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 SOD3P08294 240 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 PRR5P85299 388 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 ZNF763Q0D2J5 394 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 FAPQ12884 760 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 OR2V1Q8NHB1 315 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 GPR151Q8TDV0 419 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 DCAKDQ8WVC6 231 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 ROBO4Q8WZ75 1007 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 SH3YL1Q96HL8 342 aaPredicted RBP23.15■■□□□ 1.3
PVT1-219ENST00000523427 AMDHD1Q96NU7 426 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 LMF2Q9BU23 707 aaKnown RBP23.15■■□□□ 1.3
PVT1-219ENST00000523427 C3orf14Q9HBI5 128 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 RNF115Q9Y4L5 304 aa23.15■■□□□ 1.3
PVT1-219ENST00000523427 POLR3HQ9Y535 204 aaPredicted RBP23.15■■□□□ 1.3
PVT1-219ENST00000523427 ANK3Q12955 4377 aaKnown RBP23.15■■□□□ 1.3
PVT1-219ENST00000523427 TMCC2O75069 709 aa23.14■■□□□ 1.29
PVT1-219ENST00000523427 IL11P20809 199 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms