RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LTB4RQ15722 352 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 ESPNLQ6ZVH7 1005 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 P2RY8Q86VZ1 359 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 TXLNBQ8N3L3 684 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 OR4N2Q8NGD1 307 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 MRPL24Q96A35 216 aaKnown RBP12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 VSTM2LQ96N03 204 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 INPP5KQ9BT40 448 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 TRMOQ9BU70 441 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 CD244Q9BZW8 370 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 DERL2Q9GZP9 239 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 PLAC1Q9HBJ0 212 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 FLRT3Q9NZU0 649 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 ABCG2Q9UNQ0 655 aa12.2□□□□□ -0.46
NKX3-1-202ENST00000523261 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 BANF1O75531 89 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 ALX3O95076 343 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 PGM3O95394 542 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 PABPC4LP0CB38 370 aaKnown RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 ZNF17P17021 662 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 CSNK2A2P19784 350 aaPredicted RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 APEX1P27695 318 aaKnown RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 ZNF83P51522 516 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 CHN2P52757 468 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 MORF4L2Q15014 288 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 OR4D1Q15615 310 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 ZNF239Q16600 458 aaKnown RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 MST1LQ2TV78 715 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 HBMQ6B0K9 141 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 SPATA6LQ8N4H0 392 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 CEP112Q8N8E3 955 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 NAT8LQ8N9F0 302 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 OSTF1Q92882 214 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 NPAS1Q99742 590 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 ANKRA2Q9H9E1 313 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 PPANQ9NQ55 473 aaKnown RBP12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 CD274Q9NZQ7 290 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 VDAC3Q9Y277 283 aa12.19□□□□□ -0.46
NKX3-1-202ENST00000523261 IGLV3-32A0A0A0MS00 114 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 NPIPA5A0A0B4J1W7 369 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 FAM95CA0A1B0GW59 222 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 OR5H1A6NKK0 313 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 NPIPA7E9PJI5 369 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 ERAL1O75616 437 aaKnown RBP12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 WISP3O95389 354 aaPredicted RBP12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 CTAGE8P0CG41 777 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 NPIPA8P0DM63 369 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 GGT1P19440 569 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 COX5AP20674 150 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 PSMA4P25789 261 aaKnown RBP12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 PSPHP78330 225 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 ACAP2Q15057 778 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 SLC48A1Q6P1K1 146 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 TRMT10BQ6PF06 316 aaKnown RBP12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 IGDCC3Q8IVU1 814 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 CTAGE4Q8IX94 777 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 SVOPLQ8N434 492 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 ANKS4BQ8N8V4 417 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 JMJD8Q96S16 334 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 GP6Q9HCN6 339 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 PRSS50Q9UI38 385 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 PCDHGA11Q9Y5H2 935 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 PCDHA9Q9Y5H5 950 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 PSAT1Q9Y617 370 aa12.18□□□□□ -0.46
NKX3-1-202ENST00000523261 GMFGO60234 142 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 FGGP02679 453 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 YES1P07947 543 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 ARAFP10398 606 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 IGHV1-2P23083 117 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 EDNRAP25101 427 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 GIFP27352 417 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 OR3A2P47893 321 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 RAC1P63000 192 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 KLHL17Q6TDP4 642 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 ZC3HC1Q86WB0 502 aaKnown RBP12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 MYLK4Q86YV6 388 aaPredicted RBP12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 SLC44A2Q8IWA5 706 aaPredicted RBP12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 GTPBP8Q8N3Z3 284 aaPredicted RBP12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 MAIP1Q8WWC4 291 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 FBXO17Q96EF6 278 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 SNX18Q96RF0 628 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 TMEM185BQ9H7F4 350 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 MYNNQ9NPC7 610 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 WBP11Q9Y2W2 641 aaKnown RBP12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 ATP23Q9Y6H3 246 aa12.17□□□□□ -0.46
NKX3-1-202ENST00000523261 C1orf226A1L170 272 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 H0YIV9 168 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 K7EPI3 171 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 SEMA3DO95025 777 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 STAMBPO95630 424 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 CARD18P57730 90 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 PHEXP78562 749 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 FOXL1Q12952 345 aa12.16□□□□□ -0.46
NKX3-1-202ENST00000523261 OCLNQ16625 522 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms