RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 GPC1P35052 558 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 EEF1A1P68104 462 aaKnown RBP13.86□□□□□ -0.19
MRPS28-209ENST00000522987 ZNHIT3Q15649 155 aaPredicted RBP13.86□□□□□ -0.19
MRPS28-209ENST00000522987 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 EEF1A1P5Q5VTE0 462 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 CLEC6AQ6EIG7 209 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 NOXRED1Q6NXP6 359 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 GSPT2Q8IYD1 628 aaKnown RBP13.86□□□□□ -0.19
MRPS28-209ENST00000522987 CLHC1Q8NHS4 586 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 GPR151Q8TDV0 419 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 ELP4Q96EB1 424 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 SLC39A3Q9BRY0 314 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 TMEM185BQ9H7F4 350 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 RNF122Q9H9V4 155 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 MYNNQ9NPC7 610 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 FAM120CQ9NX05 1096 aaKnown RBP13.86□□□□□ -0.19
MRPS28-209ENST00000522987 ABCG2Q9UNQ0 655 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 STK38LQ9Y2H1 464 aa13.86□□□□□ -0.19
MRPS28-209ENST00000522987 RTTNQ86VV8 2226 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 CCDC151A5D8V7 595 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 G3V2L1 256 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 PLAUP00749 431 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 GSTA1P08263 222 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 MYL2P10916 166 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 TBXA2RP21731 343 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 LOXP28300 417 aaPredicted RBP13.85□□□□□ -0.19
MRPS28-209ENST00000522987 CLK3P49761 638 aaKnown RBP13.85□□□□□ -0.19
MRPS28-209ENST00000522987 EEFSECP57772 596 aaKnown RBP13.85□□□□□ -0.19
MRPS28-209ENST00000522987 RPS3AP61247 264 aaKnown RBP13.85□□□□□ -0.19
MRPS28-209ENST00000522987 ZNF385BQ569K4 471 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 FIGNL1Q6PIW4 674 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 ZAR1Q86SH2 424 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 GGNQ86UU5 652 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 OR2L13Q8N349 312 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.85□□□□□ -0.19
MRPS28-209ENST00000522987 NUDT8Q8WV74 236 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 PIGTQ969N2 578 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 ARSGQ96EG1 525 aa13.85□□□□□ -0.19
MRPS28-209ENST00000522987 SH3YL1Q96HL8 342 aaPredicted RBP13.85□□□□□ -0.19
MRPS28-209ENST00000522987 SMIM23A6NLE4 172 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 PDPK1O15530 556 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 CXCL13O43927 109 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 SEC22BO75396 215 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 PSMG1O95456 288 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 PLGP00747 810 aaPredicted RBP13.84□□□□□ -0.19
MRPS28-209ENST00000522987 THBDP07204 575 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 ABHD2P08910 425 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 NID1P14543 1247 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 GANABQ14697 944 aaKnown RBP13.84□□□□□ -0.19
MRPS28-209ENST00000522987 ZYG11AQ6WRX3 759 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 WFDC8Q8IUA0 241 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 MNS1Q8NEH6 495 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 PPP1R14CQ8TAE6 165 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 COX4I2Q96KJ9 171 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 MARK4Q96L34 752 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 LMF2Q9BU23 707 aaKnown RBP13.84□□□□□ -0.19
MRPS28-209ENST00000522987 C12orf49Q9H741 205 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 FBXO34Q9NWN3 711 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 SIRT5Q9NXA8 310 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 ELOVL5Q9NYP7 299 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 PSMC3IPQ9P2W1 217 aaPredicted RBP13.84□□□□□ -0.19
MRPS28-209ENST00000522987 ZNF175Q9Y473 711 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 CSPG4Q6UVK1 2322 aa13.84□□□□□ -0.19
MRPS28-209ENST00000522987 ZANQ9Y493 2812 aa13.83□□□□□ -0.19
MRPS28-209ENST00000522987 JMJD1CQ15652 2540 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.83□□□□□ -0.2
MRPS28-209ENST00000522987 TNFSF11O14788 317 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 KCNH1O95259 989 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 NTN1O95631 604 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 CD8BP10966 210 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 ACP2P11117 423 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 FPR1P21462 350 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 NR1H2P55055 460 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 CTBP2P56545 445 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 PSPHP78330 225 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 C17orf67Q0P5P2 114 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 CFAP157Q5JU67 520 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 CCNJQ5T5M9 372 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 FRMD7Q6ZUT3 714 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 FAM214BQ7L5A3 538 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 METTL25Q8N6Q8 603 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 CCDC63Q8NA47 563 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 OR4C3Q8NH37 302 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 OR10D3Q8NH80 312 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 MZB1Q8WU39 189 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 TSSK3Q96PN8 268 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 PIP5K1AQ99755 562 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 RHOXF2Q9BQY4 288 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 BAIAP2L1Q9UHR4 511 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 MRTO4Q9UKD2 239 aaKnown RBP13.83□□□□□ -0.2
MRPS28-209ENST00000522987 GRID1Q9ULK0 1009 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 CR1P17927 2039 aa13.83□□□□□ -0.2
MRPS28-209ENST00000522987 SERTM1A2A2V5 107 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 KIAA1324LA8MWY0 1029 aaPredicted RBP13.82□□□□□ -0.2
MRPS28-209ENST00000522987 NDUFB5O43674 189 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 RSL1D1O76021 490 aaKnown RBP13.82□□□□□ -0.2
MRPS28-209ENST00000522987 OXSR1O95747 527 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms