RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 SCGB2B2Q4G0G5 96 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 EOGTQ5NDL2 527 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SFRP5Q5T4F7 317 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SH3PXD2AQ5TCZ1 1133 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 LIPMQ5VYY2 423 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 NADSYN1Q6IA69 706 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 OR52W1Q6IF63 320 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 H3F3CQ6NXT2 135 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 TRAT1Q6PIZ9 186 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 USP17L6PQ6QN14 398 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 MFSD9Q8NBP5 474 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 OR2G2Q8NGZ5 317 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 LMO3Q8TAP4 145 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 DNAJB14Q8TBM8 379 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SPPL2AQ8TCT8 520 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 ZCCHC14Q8WYQ9 949 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 CDS1Q92903 461 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 MR1Q95460 341 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 HIST1H2BAQ96A08 127 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 ECHDC3Q96DC8 303 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 TGM7Q96PF1 710 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 MTERF1Q99551 399 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SOSTQ9BQB4 213 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 HAPLN2Q9GZV7 340 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 DPEP2Q9H4A9 486 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 UBE2TQ9NPD8 197 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 EXOSC3Q9NQT5 275 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 ZNF629Q9UEG4 869 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 CAMK2AQ9UQM7 478 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SLC35A3Q9Y2D2 325 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 ZNF638Q14966 1978 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 CCDC187A0A096LP49 1063 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 UBA6A0AVT1 1052 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 MCRIP1C9JLW8 97 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 M0R143 59 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 M0R296 226 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 AGRPO00253 132 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 FLRT2O43155 660 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SOD2P04179 222 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 GABRB1P18505 474 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 ZNF10P21506 573 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 MATKP42679 507 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 NPBWR1P48145 328 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 RGS4P49798 205 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 RAP1BP61224 184 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 CXADRP78310 365 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 MRPS10P82664 201 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 HEPACAMQ14CZ8 416 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 GCNT6Q5T4J0 391 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 LRRC38Q5VT99 294 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 KHDRBS2Q5VWX1 349 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 GPAT2Q6NUI2 795 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 BIVMQ86UB2 503 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 TSPAN33Q86UF1 283 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 TNS4Q8IZW8 715 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 CLDN22Q8N7P3 220 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 RDH13Q8NBN7 331 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 OR8J3Q8NGG0 315 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 OR2D3Q8NGH3 330 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SPPL2BQ8TCT7 592 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SLC35F5Q8WV83 523 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 LPAR1Q92633 364 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 TMEM125Q96AQ2 219 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 TCTN2Q96GX1 697 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 ZSCAN10Q96SZ4 725 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 RBBP8Q99708 897 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 KLHDC3Q9BQ90 382 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 SNHG12Q9BXW3 62 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 OR52A5Q9H2C5 316 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 VNN3Q9NY84 501 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 NDOR1Q9UHB4 597 aa7.8□□□□□ -1.16
HMGB4-204ENST00000522796 LEF1Q9UJU2 399 aaPredicted RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 OAS3Q9Y6K5 1087 aaKnown RBP7.8□□□□□ -1.16
HMGB4-204ENST00000522796 DLEC1Q9Y238 1755 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ZFC3H1O60293 1989 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 OR14I1A6ND48 311 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TBC1D3BA6NDS4 549 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 K7EP13 123 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PRODHO43272 600 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 OR2T1O43869 369 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 GGCTO75223 188 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 SC5DO75845 299 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TOXO94900 526 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 CALCAP01258 141 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ALDOBP05062 364 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 RPLP1P05386 114 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 STAG3L2P0CL84 134 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 VEGFAP15692 232 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 NCK1P16333 377 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 SMPD1P17405 629 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PTPRAP18433 802 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 CNR1P21554 472 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 APEX1P27695 318 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 SSTR4P31391 388 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 NAA10P41227 235 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 EVX1P49640 407 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TMEM33P57088 247 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MAXP61244 160 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TLE4Q04727 773 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TSTA3Q13630 321 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms