RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LYARQ9NX58 379 aaKnown RBP7.78□□□□□ -1.16
TRAPPC9-212ENST00000521944 SPEF1Q9Y4P9 236 aa7.78□□□□□ -1.16
TRAPPC9-212ENST00000521944 AP4B1Q9Y6B7 739 aa7.78□□□□□ -1.16
TRAPPC9-212ENST00000521944 COL7A1Q02388 2944 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 NPIPA5A0A0B4J1W7 369 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 SYCE3A1L190 88 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 NPEPPSL1A6NEC2 478 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 NPIPA7E9PJI5 369 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 ADAMDEC1O15204 470 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CXCL13O43927 109 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 MFAP3LO75121 409 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 LYZL6O75951 148 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 SLU7O95391 586 aaKnown RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PGM3O95394 542 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 BPNT1O95861 308 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PTMAP06454 111 aaKnown RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 NPIPA8P0DM63 369 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CT45A8P0DMV1 189 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CT45A9P0DMV2 189 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TPSB2P20231 275 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CD40P25942 277 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 GIFP27352 417 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 APEX1P27695 318 aaKnown RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TLX1P31314 330 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 NTF4P34130 210 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PPICP45877 212 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 RPS3AP61247 264 aaKnown RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 DUSP2Q05923 314 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TRIP10Q15642 601 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TPSAB1Q15661 275 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CARTPTQ16568 116 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PRICKLE4Q2TBC4 344 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CT45A2Q5DJT8 189 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PPP4R4Q6NUP7 873 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 ZNF544Q6NX49 715 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 SLC22A25Q6T423 547 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TUSC5Q8IXB3 177 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 ANKS4BQ8N8V4 417 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 CCDC89Q8N998 374 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 OR4K17Q8NGC6 315 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 ABHD3Q8WU67 409 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TAF15Q92804 592 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TMCO6Q96DC7 493 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 C1GALT1C1Q96EU7 318 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PTCD3Q96EY7 689 aaKnown RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 RADILQ96JH8 1075 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 NAP1L3Q99457 506 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 C1QTNF5Q9BXJ0 243 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PRRG4Q9BZD6 226 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 TSGA10Q9BZW7 698 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 UNKLQ9H9P5 680 aaKnown RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 GPRC5BQ9NZH0 403 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 FLRT3Q9NZU0 649 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PHF11Q9UIL8 331 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 GPR55Q9Y2T6 319 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 PLLPQ9Y342 182 aa7.77□□□□□ -1.17
TRAPPC9-212ENST00000521944 A0A0J9YW62 118 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 REM1O75628 298 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 STAMBPO95630 424 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 TUBBP07437 444 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 CCDC175P0C221 793 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 NR2F6P10588 404 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 CPMP14384 443 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 BSGP35613 385 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 GGT5P36269 586 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 MAGEA6P43360 314 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 HNMTP50135 292 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 XKP51811 444 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 TERF1P54274 439 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 CORO7P57737 925 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 UBA52P62987 128 aaKnown RBP7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 CDK16Q00536 496 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 FOXL1Q12952 345 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 STK11Q15831 433 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 TRMT12Q53H54 448 aaKnown RBP7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 ARMC3Q5W041 872 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 NPSR1Q6W5P4 371 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 TBC1D1Q86TI0 1168 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 LMNTD2Q8IXW0 634 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 LAS2Q8IYD9 372 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 GBP7Q8N8V2 638 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 OR7G3Q8NG95 312 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 MTBPQ96DY7 904 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 SNX18Q96RF0 628 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 INPP5KQ9BT40 448 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 ANKRA2Q9H9E1 313 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 SMYD2Q9NRG4 433 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 MED29Q9NX70 200 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 MAT2BQ9NZL9 334 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 OARD1Q9Y530 152 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 PTGDR2Q9Y5Y4 395 aa7.76□□□□□ -1.17
TRAPPC9-212ENST00000521944 NOTCH3Q9UM47 2321 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 UQCRHLA0A096LP55 91 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 MAGEB16A2A368 324 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 TNFSF11O14788 317 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 FADS1O60427 444 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 GBAP04062 536 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 FAM58BPP0C7Q3 252 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 NT5EP21589 574 aa7.75□□□□□ -1.17
TRAPPC9-212ENST00000521944 IGHV1-2P23083 117 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms