RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 UGT2B11O75310 529 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 PPM1BO75688 479 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 SP1P08047 785 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 NR2F1P10589 423 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 NCK1P16333 377 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 GGT1P19440 569 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 RFX3P48380 749 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 TMED10P49755 219 aaKnown RBP14.06□□□□□ -0.16
LSM1-203ENST00000520755 CHRNEQ04844 493 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 ZNF791Q3KP31 576 aaPredicted RBP14.06□□□□□ -0.16
LSM1-203ENST00000520755 SPATS1Q496A3 300 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 GPAT3Q53EU6 434 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 ERICH5Q6P6B1 374 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 RTL4Q6ZR62 310 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 MDGA2Q7Z553 956 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 FBXW8Q8N3Y1 598 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 HIPK4Q8NE63 616 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 OR10G3Q8NGC4 313 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 DIO2Q92813 273 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 HGDQ93099 445 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 CCDC124Q96CT7 223 aaKnown RBP14.06□□□□□ -0.16
LSM1-203ENST00000520755 TREX2Q9BQ50 279 aaPredicted RBP14.06□□□□□ -0.16
LSM1-203ENST00000520755 SAP130Q9H0E3 1048 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 QRSL1Q9H0R6 528 aaKnown RBP14.06□□□□□ -0.16
LSM1-203ENST00000520755 PCDHAC1Q9H158 963 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 BCL2L10Q9HD36 194 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 TIMMDC1Q9NPL8 285 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 SUCOQ9UBS9 1254 aaKnown RBP14.06□□□□□ -0.16
LSM1-203ENST00000520755 EGFL7Q9UHF1 273 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 SLC7A8Q9UHI5 535 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 KCNE5Q9UJ90 142 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 LIPT1Q9Y234 373 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 PCDHGB3Q9Y5G1 929 aa14.06□□□□□ -0.16
LSM1-203ENST00000520755 G3V3Y1 287 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 ARPC2O15144 300 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 REM1O75628 298 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 SOX30O94993 753 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 PGM3O95394 542 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 GUSBP08236 651 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 CYP4B1P13584 511 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 ATP6V1B2P21281 511 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 RPS4Y1P22090 263 aaKnown RBP14.05□□□□□ -0.16
LSM1-203ENST00000520755 ME2P23368 584 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 IL12BP29460 328 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 AQP1P29972 269 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 KRT20P35900 424 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 CRISP3P54108 245 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 PSPHP78330 225 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 MS4A2Q01362 244 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 VEZF1Q14119 521 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 NTRK2Q16620 822 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 DECR1Q16698 335 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 PRAMEF8Q5VWM4 474 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 PRAMEF7Q5VXH5 474 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 AP1ARQ63HQ0 302 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 SLC25A25Q6KCM7 469 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 REEP3Q6NUK4 255 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 LRRC74BQ6ZQY2 392 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 GALNTL5Q7Z4T8 443 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 HMGN2P46Q86SG4 172 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 DND1Q8IYX4 353 aaKnown RBP14.05□□□□□ -0.16
LSM1-203ENST00000520755 Q8NA96 180 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 TMEM178AQ8NBL3 297 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 PSD4Q8NDX1 1056 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 RNF138Q8WVD3 245 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 MCUR1Q96AQ8 359 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 ZG16BQ96DA0 208 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 SCMH1Q96GD3 660 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 SGCZQ96LD1 299 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 MKLN1Q9UL63 735 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 ANGPT4Q9Y264 503 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 WDR45Q9Y484 360 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 PCDHGA10Q9Y5H3 936 aa14.05□□□□□ -0.16
LSM1-203ENST00000520755 OR6C70A6NIJ9 312 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 TMEM229AB2RXF0 380 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 ANKRD65E5RJM6 399 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 CXCR6O00574 342 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 TP53I11O14683 189 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 ACOT8O14734 319 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 NME2P1O60361 137 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 ICOSLGO75144 302 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 STX11O75558 287 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 CCL3P10147 92 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 NAGAP17050 411 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 NME2P22392 152 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 PNLIPRP2P54317 469 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 GPR85P60893 370 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 HPCAP84074 193 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 PLAURQ03405 335 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 BNIP2Q12982 314 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 MAPK14Q16539 360 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 GRAMD1BQ3KR37 738 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 CCDC80Q76M96 950 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 ZNF619Q8N2I2 560 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 METTL25Q8N6Q8 603 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 GOLM1Q8NBJ4 401 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 BBS10Q8TAM1 723 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 TAMM41Q96BW9 452 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 COL21A1Q96P44 957 aa14.04□□□□□ -0.16
LSM1-203ENST00000520755 ADOQ96SZ5 270 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms