RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 MID1IP1Q9NPA3 183 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 FANCFQ9NPI8 374 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 STARD5Q9NSY2 213 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 PIGVQ9NUD9 493 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 RBM28Q9NW13 759 aaKnown RBP2.49□□□□□ -2.01
SKP1-207ENST00000520417 COMMD8Q9NX08 183 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 FZR1Q9UM11 496 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 IFT52Q9Y366 437 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 PLEKHG1Q9ULL1 1385 aa2.49□□□□□ -2.01
SKP1-207ENST00000520417 GAKO14976 1311 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 SMIM28A0A1B0GU29 152 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 A6NDX4 124 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 KINO60870 393 aaKnown RBP2.48□□□□□ -2.01
SKP1-207ENST00000520417 SCRG1O75711 98 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 PNPP00491 289 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 HTR1EP28566 365 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 AXLP30530 894 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 NUP107P57740 925 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 SRYQ05066 204 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 GFPT1Q06210 699 aaPredicted RBP2.48□□□□□ -2.01
SKP1-207ENST00000520417 LRRC36Q1X8D7 754 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 ZNF699Q32M78 642 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 TOR1AIP1Q5JTV8 583 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 ASPHD2Q6ICH7 369 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 SYVN1Q86TM6 617 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 Q8N9W7 124 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 C20orf203Q8NBC4 194 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 OR2AP1Q8NGE2 309 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 CABS1Q96KC9 395 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 MBOAT4Q96T53 435 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 FAM124BQ9H5Z6 455 aaPredicted RBP2.48□□□□□ -2.01
SKP1-207ENST00000520417 NTN4Q9HB63 628 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 APMAPQ9HDC9 416 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 NANSQ9NR45 359 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 OR1A1Q9P1Q5 309 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 MBD2Q9UBB5 411 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 DUSP12Q9UNI6 340 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 MYO10Q9HD67 2058 aa2.48□□□□□ -2.01
SKP1-207ENST00000520417 MACROD2A1Z1Q3 448 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 SAGE2PA6NJ88 616 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 TMX2-CTNND1H3BSU7 103 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 DDX39AO00148 427 aaKnown RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 PPIHO43447 177 aaKnown RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 BUB1O43683 1085 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 KERAO60938 352 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 KLF8O95600 359 aaPredicted RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 GNSP15586 552 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 RPL4P36578 427 aaKnown RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 NUDT1P36639 197 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 RPL29P47914 159 aaKnown RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 GPC3P51654 580 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 CCL11P51671 97 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 PAX5Q02548 391 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ACTN3Q08043 901 aaPredicted RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 EGFEM1PQ0D2K5 195 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 PPP1R8Q12972 351 aaKnown RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 UBE2V2Q15819 145 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 CARTPTQ16568 116 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 AANATQ16613 207 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 PRAMEF7Q5VXH5 474 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 LIPKQ5VXJ0 399 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ETFRF1Q6IPR1 90 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 HACD2Q6Y1H2 254 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 P4HA3Q7Z4N8 544 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ZNF410Q86VK4 478 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 SFRP1Q8N474 314 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ZNF713Q8N859 430 aaPredicted RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 OR2A12Q8NGT7 310 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 OR9A1PQ8NGU1 263 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ARNTL2Q8WYA1 636 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ART4Q93070 314 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 MYDGFQ969H8 173 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 TMEM80Q96HE8 168 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ACAT2Q9BWD1 397 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 NMNAT2Q9BZQ4 307 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 ZNF282Q9UDV7 671 aaPredicted RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.47□□□□□ -2.01
SKP1-207ENST00000520417 NPC1L1Q9UHC9 1359 aa2.47□□□□□ -2.01
SKP1-207ENST00000520417 SYCE3A1L190 88 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 FAM166BA8MTA8 275 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 ZNF264O43296 627 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 TRAF3IP2O43734 574 aaPredicted RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 NME2P1O60361 137 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 CABYRO75952 493 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 STK17BO94768 372 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 IGHV4-34P06331 123 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 CD55P08174 381 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 HLA-DPA1P20036 260 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 HPDP32754 393 aaPredicted RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 PPP2R5CQ13362 524 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 UNC119Q13432 240 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 EIF4EBP1Q13541 118 aaPredicted RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 KARSQ15046 597 aaKnown RBP2.46□□□□□ -2.02
SKP1-207ENST00000520417 ZFP2Q6ZN57 461 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 AMZ2Q86W34 360 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 TMEM252Q8N6L7 170 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 SUMF2Q8NBJ7 301 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 LEMD2Q8NC56 503 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 C7orf33Q8WU49 177 aa2.46□□□□□ -2.02
SKP1-207ENST00000520417 PHYHIPQ92561 330 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms