RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GSSP48637 474 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 AP3M2P53677 418 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 NAA20P61599 178 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GTF2BQ00403 316 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ABRQ12979 859 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SELENBP1Q13228 472 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF177Q13360 481 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 UBE2SQ16763 222 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF789Q5FWF6 425 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 FKBP1CQ5VVH2 108 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLX4IPQ5VYV7 408 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC27A4Q6P1M0 643 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TTC23LQ6PF05 361 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GDPGP1Q6ZNW5 385 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SMIM5Q71RC9 77 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 PEX26Q7Z412 305 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TRMT11Q7Z4G4 463 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GRAMD2AQ8IUY3 354 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 MMAAQ8IVH4 418 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SIAH3Q8IW03 269 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TUSC5Q8IXB3 177 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 CENPSQ8N2Z9 138 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ELMOD1Q8N336 334 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM133AQ8N9E0 248 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 UXS1Q8NBZ7 420 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR7G1Q8NGA0 311 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR5M9Q8NGP3 310 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANGPTL6Q8NI99 470 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DTX3LQ8TDB6 740 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GIPC3Q8TF64 312 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DYDC1Q8WWB3 177 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 CTNNBL1Q8WYA6 563 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF75CPQ92670 426 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATP6V0A1Q93050 837 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCDC127Q96BQ5 260 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SNRNP40Q96DI7 357 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 CNRIP1Q96F85 164 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 EEF2KMTQ96G04 330 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATXN7L3BQ96GX2 97 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKRD36BP1Q96IX9 119 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC45A3Q96JT2 553 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 PCDHB18PQ96TA0 734 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 VGLL1Q99990 258 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SELENOSQ9BQE4 189 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GPATCH1Q9BRR8 931 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 LRRC61Q9BV99 259 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 PAPOLGQ9BWT3 736 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 MROQ9BYG7 248 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 MRPS26Q9BYN8 205 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC7A5P2Q9GIP4 190 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 C1orf21Q9H246 121 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 PARLQ9H300 379 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 CDC42EP4Q9H3Q1 356 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GOLPH3Q9H4A6 298 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DPEP2Q9H4A9 486 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SRD5A3Q9H8P0 318 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 C12orf10Q9HB07 376 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GPN1Q9HCN4 374 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 S100A14Q9HCY8 104 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLCO1B3Q9NPD5 702 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DDX18Q9NVP1 670 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMEM161AQ9NX61 479 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 NLGN3Q9NZ94 848 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANGPTL2Q9UKU9 493 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 RABL2BQ9UNT1 228 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 GPR132Q9UNW8 380 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 SATB2Q9UPW6 733 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 LIPT1Q9Y234 373 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 NCKAP1Q9Y2A7 1128 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 IFT52Q9Y366 437 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 COQ4Q9Y3A0 265 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 MOB4Q9Y3A3 225 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 RNF11Q9Y3C5 154 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 PCDHGA1Q9Y5H4 931 aa2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DICER1Q9UPY3 1922 aaKnown RBP2.74□□□□□ -1.97
HMGB1P41-201ENST00000520234 DDX60LQ5H9U9 1706 aaKnown RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ASTN1O14525 1302 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 IGHV3OR16-10A0A075B7F0 116 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 IGHV4-30-2A0A087WSY4 118 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ASB14A6NK59 587 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 EPM2AB3EWF7 344 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 K7EPI3 171 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CTDSPLO15194 276 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 ST8SIA3O43173 380 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 TLX2O43763 284 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CDH16O75309 829 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CLN5O75503 358 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 GRAP2O75791 330 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 NDUFB10O96000 172 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 FGGP02679 453 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 RPLP0P05388 317 aaKnown RBP2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 TFPTP0C1Z6 253 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 POLR2MP0CAP2 368 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 THEGLP0DJG4 465 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 C8orf89P0DMQ9 161 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 M6PRP20645 277 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CXCR2P25025 360 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 CHRNA3P32297 505 aa2.73□□□□□ -1.97
HMGB1P41-201ENST00000520234 S100A5P33763 92 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms