RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 SLC6A15Q9H2J7 730 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 LAMB2P55268 1798 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 C5orf51A6NDU8 294 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ARHGAP33O14559 1287 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 SLCO2B1O94956 709 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ITGB8P26012 769 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 STOMP27105 288 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 CXCR4P61073 352 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 BCL7AQ4VC05 210 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 FAM111BQ6SJ93 734 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 CYHR1Q6ZMK1 362 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 Q6ZSR6 202 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 SLITRK4Q8IW52 837 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 SDR9C7Q8NEX9 313 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 OR6C4Q8NGE1 309 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 GPN2Q9H9Y4 310 aaPredicted RBP11.01□□□□□ -0.65
SYNPO-204ENST00000519664 HSFX1Q9UBD0 423 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 AK6Q9Y3D8 172 aaKnown RBP11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ARFGEF1Q9Y6D6 1849 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
SYNPO-204ENST00000519664 A0A1W2PQ09 198 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 SLC22A31A6NKX4 558 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 PRRT4C9JH25 899 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 CD300LGQ6UXG3 332 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 ZNF550Q7Z398 422 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 OR2AJ1Q8NGZ0 328 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 SPRYD4Q8WW59 207 aaPredicted RBP11.01□□□□□ -0.65
SYNPO-204ENST00000519664 TOX2Q96NM4 488 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 PELI2Q9HAT8 420 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 CLEC2DQ9UHP7 191 aa11.01□□□□□ -0.65
SYNPO-204ENST00000519664 PRODHO43272 600 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SEMA4FO95754 770 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 AIFM1O95831 613 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SPTBP11277 2137 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ATP5A1P25705 553 aaKnown RBP11□□□□□ -0.65
SYNPO-204ENST00000519664 PSMB10P40306 273 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 CCR2P41597 374 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SQSTM1Q13501 440 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 NTRK2Q16620 822 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 GGTA1PQ4G0N0 100 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 IL20RBQ6UXL0 311 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SDR16C5Q8N3Y7 309 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 CASTOR1Q8WTX7 329 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SGTBQ96EQ0 304 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 FOXN4Q96NZ1 517 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 PKMYT1Q99640 499 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ALG8Q9BVK2 526 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 TMEM168Q9H0V1 697 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 LOC105369274A0A096LPK9 316 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 CDC14CA4D256 554 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 H7C2Y5 167 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 CLEC3AO75596 197 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 OR3A3P47888 321 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 OR3A2P47893 321 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 METAP1P53582 386 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 HES5Q5TA89 166 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 AGAP6Q5VW22 663 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 STX12Q86Y82 276 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 OR4N4Q8N0Y3 316 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 CADM3Q8N126 398 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SIMC1Q8NDZ2 872 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 OR6T1Q8NGN1 323 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 HMGCLL1Q8TB92 370 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 AGAP4Q96P64 663 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 OR7D2Q96RA2 312 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SNX18Q96RF0 628 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ALOXE3Q9BYJ1 711 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ZBP1Q9H171 429 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ATG4BQ9Y4P1 393 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 NOX1Q9Y5S8 564 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 LOXHD1Q8IVV2 1947 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ADAM23O75077 832 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 NCR1O76036 304 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 PRKCAP17252 672 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 NSDHLQ15738 373 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 TBCEQ15813 527 aaPredicted RBP11□□□□□ -0.65
SYNPO-204ENST00000519664 NKG7Q16617 165 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 BCL2L15Q5TBC7 163 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 LHX8Q68G74 356 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 PAQR7Q86WK9 346 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 RPLP0P6Q8NHW5 317 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 PDE7BQ9NP56 450 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 PRSS16Q9NQE7 514 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 SERTAD3Q9UJW9 196 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 GMEB2Q9UKD1 530 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 IER3IP1Q9Y5U9 82 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ZDBF2Q9HCK1 2354 aa11□□□□□ -0.65
SYNPO-204ENST00000519664 ZNF726A6NNF4 738 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 LRRN3E7EW58 273 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 NPIPA5E9PKD4 350 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 YBX1P67809 324 aaKnown RBP10.99□□□□□ -0.65
SYNPO-204ENST00000519664 ENTPD8Q5MY95 495 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 LIMS2Q7Z4I7 341 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 RASGRP3Q8IV61 690 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 FAM83FQ8NEG4 500 aaPredicted RBP10.99□□□□□ -0.65
SYNPO-204ENST00000519664 OR5K2Q8NHB8 316 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 TMEM239Q8WW34 195 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 EID2BQ96D98 161 aa10.99□□□□□ -0.65
SYNPO-204ENST00000519664 HRASLS5Q96KN8 279 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms