RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ELAVL4P26378 380 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 KRT20P35900 424 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 RFX3P48380 749 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 ST3GAL3Q11203 375 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZIK1Q3SY52 487 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 FGD3Q5JSP0 725 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 MRPL2Q5T653 305 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 UGT2A3Q6UWM9 527 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 SHISA6Q6ZSJ9 500 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 LANCL3Q6ZV70 420 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 USP51Q70EK9 711 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 CPEB2Q7Z5Q1 589 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 HMGN2P46Q86SG4 172 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 COMTD1Q86VU5 262 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 RBM45Q8IUH3 476 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 CLIP4Q8N3C7 705 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZNF527Q8NB42 609 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 B3GNT7Q8NFL0 401 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 OR52J3Q8NH60 311 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 ADIPOR1Q96A54 375 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 LPAR4Q99677 370 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 MCHR1Q99705 422 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 BARD1Q99728 777 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 SEMA4CQ9C0C4 833 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 PARD6AQ9NPB6 346 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 FBXO34Q9NWN3 711 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 FAM118AQ9NWS6 357 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 TESQ9UGI8 421 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 MGAT4BQ9UQ53 548 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 CHST2Q9Y4C5 530 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 KIF26BQ2KJY2 2108 aa13.93□□□□□ -0.18
TRAPPC9-205ENST00000518839 NPIPB9F8W1W9 429 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 PEX12O00623 359 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 TNFAIP8O95379 198 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 ADAP00813 363 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 IGKV1D-16P01601 117 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 LYNP07948 512 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 IFNGR2P38484 337 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 KCNAB2Q13303 367 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 FGFBP1Q14512 234 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 LAPTM4AQ15012 233 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 TRAM2Q15035 370 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 TRIP6Q15654 476 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 NPTX1Q15818 432 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 MAPK14Q16539 360 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 TMEM164Q5U3C3 297 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 FAAH2Q6GMR7 532 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 FAM198BQ6UWH4 519 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZNF517Q6ZMY9 492 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 PLEKHM3Q6ZWE6 761 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZNF321PQ8N8H1 164 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 SETD9Q8NE22 299 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 OR4N2Q8NGD1 307 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 OR8K3Q8NH51 312 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 TP53INP1Q96A56 240 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 VMP1Q96GC9 406 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 MBOAT4Q96T53 435 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 FEVQ99581 238 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 WWTR1Q9GZV5 400 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 NXF5Q9H1B4 397 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 PAPOLBQ9NRJ5 636 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 UBAP1Q9NZ09 502 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 RHCGQ9UBD6 479 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 SCOCQ9UIL1 159 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 KCNE5Q9UJ90 142 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 PCDHGA3Q9Y5H0 932 aa13.92□□□□□ -0.18
TRAPPC9-205ENST00000518839 NPIPA5A0A0B4J1W7 369 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 LOC100130705A0A1B0GUX0 176 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 NPIPA7E9PJI5 369 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 CNOT3O75175 753 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 SEMA7AO75326 666 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 UBTFL6P0CB48 400 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 NPIPA8P0DM63 369 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 ENDOUP21128 410 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 CBLP22681 906 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 GPR143P51810 404 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 TPD52P55327 224 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 IL1RL1Q01638 556 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 PIN1Q13526 163 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 KEAP1Q14145 624 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 NCF4Q15080 339 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 ENTPD8Q5MY95 495 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 PDZK1Q5T2W1 519 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 LCN10Q6JVE6 187 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 PAPD4Q6PIY7 484 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZAR1Q86SH2 424 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 C9orf40Q8IXQ3 194 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZNF440Q8IYI8 595 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 C8orf59Q8N0T1 100 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 SLC34A3Q8N130 599 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 SLC5A8Q8N695 610 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 ZSCAN1Q8NBB4 408 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 NUBPLQ8TB37 319 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 DIO2Q92813 273 aa13.91□□□□□ -0.18
TRAPPC9-205ENST00000518839 GAL3ST4Q96RP7 486 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms