RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZNF354AO60765 605 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 HSF2BPO75031 334 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 TRIM3O75382 744 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 MTX2O75431 263 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 AKR7A3O95154 331 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 DIRAS3O95661 229 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 CXCL14O95715 111 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 AGTP01019 485 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ABHD2P08910 425 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 THRBP10828 461 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 CLUP10909 449 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ANXA8P13928 327 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 HSD17B1P14061 328 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ETS1P14921 441 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 MATKP42679 507 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 BRCC3P46736 316 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 TRA2BP62995 288 aaKnown RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 NOP14P78316 857 aaKnown RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 BASP1P80723 227 aaKnown RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 IL24Q13007 206 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 KLF5Q13887 457 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ARHGAP19Q14CB8 494 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 GPAT3Q53EU6 434 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 HERC4Q5GLZ8 1057 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ANXA8L1Q5VT79 327 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 STEAP1BQ6NZ63 245 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 LRRC70Q7Z2Q7 622 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 TMCO2Q7Z6W1 182 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 LUZP1Q86V48 1076 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 SLC22A16Q86VW1 577 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 SYCE1Q8N0S2 351 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 BATF2Q8N1L9 274 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ZCCHC7Q8N3Z6 543 aaKnown RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 LINC00612Q8N6U2 182 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF491Q8N8L2 437 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 BBS1Q8NFJ9 593 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 OR52M1Q8NGK5 317 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 SLC22A8Q8TCC7 542 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 DTNBP1Q96EV8 351 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 NSMCE2Q96MF7 247 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF560Q96MR9 790 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 APOL2Q9BQE5 337 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 BCL7BQ9BQE9 202 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 JPH2Q9BR39 696 aaPredicted RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 TTYH2Q9BSA4 534 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ZBP1Q9H171 429 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 CENPHQ9H3R5 247 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 EXO5Q9H790 373 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 COQ10BQ9H8M1 238 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 SYTL2Q9HCH5 934 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF446Q9NWS9 450 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 MLXQ9UH92 298 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ATPIF1Q9UII2 106 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 ANGPTL2Q9UKU9 493 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 C15orf41Q9Y2V0 281 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 SLC6A5Q9Y345 797 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 STRAPQ9Y3F4 350 aaKnown RBP2.84□□□□□ -1.95
VPS13B-207ENST00000518569 CBY1Q9Y3M2 126 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 NAALAD2Q9Y3Q0 740 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 TEX264Q9Y6I9 313 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 U3KQV3 271 aa2.84□□□□□ -1.95
VPS13B-207ENST00000518569 BCORL1Q5H9F3 1711 aa2.84□□□□□ -1.96
VPS13B-207ENST00000518569 SUPT6HQ7KZ85 1726 aaKnown RBP2.84□□□□□ -1.96
VPS13B-207ENST00000518569 MED1Q15648 1581 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CFAP43Q8NDM7 1665 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 STRCQ7RTU9 1775 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 A0A075B6Q4 140 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 NPIPA5A0A0B4J1W7 369 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 MACROD2A1Z1Q3 448 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ARHGAP42A6NI28 874 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF487B1APH4 448 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 NPIPA5E9PKD4 350 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 SPECC1L-ADORA2AF8WAN1 911 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CXCL11O14625 94 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 SH2D1BO14796 132 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CHMP2AO43633 222 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 VEGFDO43915 354 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 OTCP00480 354 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 OPN1LWP04000 364 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 KRT6BP04259 564 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 FGF4P08620 206 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 STAG3L3P0CL85 134 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 GCFC2P16383 781 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ZNF24P17028 368 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CALB2P22676 271 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PTBP1P26599 531 aaKnown RBP eCLIP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 CHRNA3P32297 505 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 RFC2P35250 354 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 MAGEA1P43355 309 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 KRT6CP48668 564 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 DHPSP49366 369 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 HSPA2P54652 639 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 ACTR3P61158 418 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 RPS4XP62701 263 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 GALK2Q01415 458 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 DR1Q01658 176 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 NAAAQ02083 359 aa2.83□□□□□ -1.96
VPS13B-207ENST00000518569 GFPT1Q06210 699 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 PPP1R8Q12972 351 aaKnown RBP2.83□□□□□ -1.96
VPS13B-207ENST00000518569 HKDC1Q2TB90 917 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms