RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 TCHHL1Q5QJ38 904 aaPredicted RBP3.75□□□□□ -1.81
PCM1-205ENST00000517836 TAF3Q5VWG9 929 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 ATRAIDQ6UW56 229 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 STOX1Q6ZVD7 989 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 VPS36Q86VN1 386 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 AMZ2Q86W34 360 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 GPBP1Q86WP2 473 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 FGFRL1Q8N441 504 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 RNF148Q8N7C7 305 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 CNNM3Q8NE01 707 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 FAM71CQ8NEG0 241 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 OR4Q3Q8NH05 313 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 DCPSQ96C86 337 aaKnown RBP3.75□□□□□ -1.81
PCM1-205ENST00000517836 CCDC51Q96ER9 411 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 SAMD8Q96LT4 415 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 TSPAN18Q96SJ8 248 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 PUS3Q9BZE2 481 aaKnown RBP3.75□□□□□ -1.81
PCM1-205ENST00000517836 TMEM231Q9H6L2 316 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 AMBNQ9NP70 447 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 MYOZ2Q9NPC6 264 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 CNOT2Q9NZN8 540 aaKnown RBP3.75□□□□□ -1.81
PCM1-205ENST00000517836 KLHDC2Q9Y2U9 406 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 MTF2Q9Y483 593 aaPredicted RBP3.75□□□□□ -1.81
PCM1-205ENST00000517836 STYXL1Q9Y6J8 313 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 SSC5DA1L4H1 1573 aa3.75□□□□□ -1.81
PCM1-205ENST00000517836 MYO5AQ9Y4I1 1855 aaKnown RBP3.75□□□□□ -1.81
PCM1-205ENST00000517836 LOC285556D6RIA3 1793 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 RBBP6Q7Z6E9 1792 aaKnown RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 AK9Q5TCS8 1911 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 TRIM49BA6NDI0 452 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 STK17BO94768 372 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 GOT2P00505 430 aaKnown RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 HPP00738 406 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 TGFAP01135 160 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 MELTFP08582 738 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 ACADSP16219 412 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 CCNA2P20248 432 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 ELK3P41970 407 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 GYG1P46976 350 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 RABIFP47224 123 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 SGSHP51688 502 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 PDIA5Q14554 519 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 LINC00242Q5T6M2 205 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 LIPKQ5VXJ0 399 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 RFWD3Q6PCD5 774 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 APOOLQ6UXV4 268 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 APOBEC3FQ8IUX4 373 aaKnown RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 ZNF397Q8NF99 534 aaPredicted RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 OR56B1Q8NGI3 324 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 FRAT1Q92837 279 aaPredicted RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 TTYH2Q9BSA4 534 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 RPP25Q9BUL9 199 aaKnown RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 WRAP53Q9BUR4 548 aaKnown RBP3.74□□□□□ -1.81
PCM1-205ENST00000517836 KRT23Q9C075 422 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 RAB17Q9H0T7 212 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 SENP1Q9P0U3 644 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 CLIP2Q9UDT6 1046 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 MLXQ9UH92 298 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 IL20RAQ9UHF4 553 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 IKZF3Q9UKT9 509 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 PTPRFP10586 1907 aa3.74□□□□□ -1.81
PCM1-205ENST00000517836 SIPA1L1O43166 1804 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 PHIPQ8WWQ0 1821 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 K7ERI5 159 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 E2F3O00716 465 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 CIAO1O76071 339 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ECDO95905 644 aaPredicted RBP3.73□□□□□ -1.81
PCM1-205ENST00000517836 OAS1P00973 400 aaKnown RBP3.73□□□□□ -1.81
PCM1-205ENST00000517836 PRDX6P30041 224 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 NF2P35240 595 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 SAA4P35542 130 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 BRCC3P46736 316 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 MFAP2P55001 183 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 SLC26A5P58743 744 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 FKBP1AP62942 108 aaKnown RBP3.73□□□□□ -1.81
PCM1-205ENST00000517836 HERVK_113P63132 956 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ERVK-8P63133 956 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 IL9RQ01113 521 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 GABPB1Q06547 395 aaPredicted RBP3.73□□□□□ -1.81
PCM1-205ENST00000517836 ZFP36L1Q07352 338 aaKnown RBP3.73□□□□□ -1.81
PCM1-205ENST00000517836 BNIP1Q12981 228 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 CYLC2Q14093 348 aaPredicted RBP3.73□□□□□ -1.81
PCM1-205ENST00000517836 C17orf58Q2M2W7 97 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 PARP6Q2NL67 630 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 DEFB115Q30KQ5 88 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 CNPY1Q3B7I2 92 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 C14orf28Q4W4Y0 310 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 CAVIN4Q5BKX8 364 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 NHLRC3Q5JS37 347 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 CST9Q5W186 159 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 LEMD1Q68G75 181 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ZSCAN30Q86W11 494 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ZNF491Q8N8L2 437 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ANKRD20A12PQ8NF67 263 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ITLN1Q8WWA0 313 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 NCLNQ969V3 563 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 FAM173AQ9BQD7 235 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 ERVK-6Q9BXR3 956 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 TRIM9Q9C026 710 aa3.73□□□□□ -1.81
PCM1-205ENST00000517836 RNF41Q9H4P4 317 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms