RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 GOLGA8RI6L899 631 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GLRA3O75311 464 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 UTS2O95399 124 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 TBXA2RP21731 343 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 RFX3P48380 749 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 SUCLG1P53597 346 aaKnown RBP13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CLDN20P56880 219 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PRR5P85299 388 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 SGCBQ16585 318 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NOXRED1Q6NXP6 359 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 FRMD7Q6ZUT3 714 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 MARCH3Q86UD3 253 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 OR6K3Q8NGY3 331 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 MARK4Q96L34 752 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 RTN4RQ9BZR6 473 aa13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 POLR3HQ9Y535 204 aaPredicted RBP13.13□□□□□ -0.31
SCARNA20.5-201ENST00000516991 TLN2Q9Y4G6 2542 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PCNX3Q9H6A9 2034 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 H7C1Q1 480 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 UBFD1O14562 309 aaKnown RBP13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PDPK1O15530 556 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ANGPTL1O95841 491 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NGFRP08138 427 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PYGBP11216 843 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GABRA3P34903 492 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 FOXA1P55317 472 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PRSS53Q2L4Q9 553 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CFAP157Q5JU67 520 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 Q71RC1 249 aaPredicted RBP13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ZNF550Q7Z398 422 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 YTHDF3Q7Z739 585 aaKnown RBP13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GGNQ86UU5 652 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ZNF610Q8N9Z0 462 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 OR5M1Q8NGP8 315 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 HOXB13Q92826 284 aaPredicted RBP13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ARSGQ96EG1 525 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GMPPAQ96IJ6 420 aaPredicted RBP13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 Q96MF0 132 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PRRG4Q9BZD6 226 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 MCTS1Q9ULC4 181 aaKnown RBP13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ROS1P08922 2347 aa13.12□□□□□ -0.31
SCARNA20.5-201ENST00000516991 C7orf72A4D263 438 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ALG1L2C9J202 215 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NPIPB8E9PQR5 432 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 EIF1AYO14602 144 aaKnown RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 TMCC2O75069 709 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PRPS2P11908 318 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PRPH2P23942 346 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 LCN1P31025 176 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GPC1P35052 558 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 EIF1AXP47813 144 aaKnown RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NR1H2P55055 460 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CTBP2P56545 445 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 DNAJB13P59910 316 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 HSPB3Q12988 150 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GRAMD1BQ3KR37 738 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 BEX5Q5H9J7 111 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 WDR75Q8IWA0 830 aaKnown RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GTPBP8Q8N3Z3 284 aaPredicted RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CDRT4Q8N9R6 151 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CEP70Q8NHQ1 597 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GPR151Q8TDV0 419 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ZBED6CLQ96FA7 236 aaPredicted RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ZC3HAV1LQ96H79 300 aaKnown RBP13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 CCT7Q99832 543 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GSX2Q9BZM3 304 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 KLHL4Q9C0H6 718 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 EQTNQ9NQ60 294 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GLRX2Q9NS18 164 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 EMCNQ9ULC0 261 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 HIVEP2P31629 2446 aa13.11□□□□□ -0.31
SCARNA20.5-201ENST00000516991 VPS13CQ709C8 3753 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 GXYLT2A0PJZ3 443 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 G3V2L1 256 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 SLC28A1O00337 649 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NDUFB5O43674 189 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 TBX19O60806 448 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 AQP8O94778 261 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NKX2-2O95096 273 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 SYNGR4O95473 234 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 OXSR1O95747 527 aaPredicted RBP13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 LY6G6DO95868 133 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PROCP04070 461 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 UROSP10746 265 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 NEFHP12036 1026 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 DDX5P17844 614 aaKnown RBP13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 LOXP28300 417 aaPredicted RBP13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 ZNF41P51814 821 aaPredicted RBP13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 SLC29A2Q14542 456 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 EXOC3L2Q2M3D2 409 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PPP4R4Q6NUP7 873 aa13.1□□□□□ -0.31
SCARNA20.5-201ENST00000516991 PLEKHM3Q6ZWE6 761 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms