RNA–Protein interactions for RNA: ENST00000516288.1

RNU6-346P-201, Transcript of RNA, U6 small nuclear 346, pseudogene, humanhuman

BASIC

Gene RNU6-346P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-346P-201ENST00000516288 CDC42EP4Q9H3Q1 356 aaKnown RBP-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 RETNQ9HD89 108 aa-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 PNPLA3Q9NST1 481 aa-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 SAGE1Q9NXZ1 904 aa-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 CPSF2Q9P2I0 782 aaKnown RBP-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 LHX3Q9UBR4 397 aa-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 UBQLN1Q9UMX0 589 aaKnown RBP-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 FAT4Q6V0I7 4981 aa-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZSWIM8A7E2V4 1837 aa-0.45□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF263O14978 683 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 RBFOX2O43251 390 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 PTP4A3O75365 173 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 AKAP3O75969 853 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 SRP72O76094 671 aaKnown RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ECDO95905 644 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 TBX18O95935 607 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 PAX3P23760 479 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 GCKP35557 465 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 DHPSP49366 369 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 RPS11P62280 158 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 FKBP1BP68106 108 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 DEFB103AP81534 67 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 MRPS11P82912 194 aaKnown RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 HSPA14Q0VDF9 509 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 EPS8Q12929 822 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 BNIP1Q12981 228 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 KLF17Q5JT82 389 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 PRR5LQ6MZQ0 368 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ATRAIDQ6UW56 229 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ANKRD46Q86W74 232 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 TAGAPQ8N103 731 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 CPXCR1Q8N123 301 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 POGLUT1Q8NBL1 392 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 OR8H1Q8NGG4 311 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 OR52J3Q8NH60 311 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 CKAP2Q8WWK9 683 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 DNAJA3Q96EY1 480 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 RMDN2Q96LZ7 410 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 S1PR3Q99500 378 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF559Q9BR84 538 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 NRN1Q9NPD7 142 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 TMEM106BQ9NUM4 274 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 SLC2A8Q9NY64 477 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 SLCO1C1Q9NYB5 712 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 SPRR3Q9UBC9 169 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 DHCR7Q9UBM7 475 aaKnown RBP-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ANAPC2Q9UJX6 822 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF222Q9UK12 451 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 PLXNB1O43157 2135 aa-0.46□□□□□ -2.48
RNU6-346P-201ENST00000516288 SYNJ2O15056 1496 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 A0A1W2PP18 115 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 hCG_1809904A0A1W2PP81 198 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 A0A1W2PPE2 198 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 A0A1W2PR64 198 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 IGKV2-29A2NJV5 120 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 PGPEP1LA6NFU8 196 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 AGAP14A8MT82 685 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 B4E171 279 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 SLC16A8O95907 504 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 MOSP00540 346 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 EZRP15311 586 aaKnown RBP-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF250P15622 560 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 AQP1P29972 269 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 RPL4P36578 427 aaKnown RBP-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 TSPAN7P41732 249 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 ALCAMQ13740 583 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF235Q14590 738 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 SPINT4Q6UDR6 99 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 SZRD1Q7Z422 152 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 VRK2Q86Y07 508 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 RTN4IP1Q8WWV3 396 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 SECISBP2LQ93073 1101 aaKnown RBP-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 C11orf24Q96F05 449 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 RPGRIP1Q96KN7 1286 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 BMFQ96LC9 184 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF558Q96NG5 402 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 MAGT1Q9H0U3 335 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 RAB9BQ9NP90 201 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 ZNF355PQ9NSJ1 428 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 AIG1Q9NVV5 245 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 DEC1Q9P2X7 70 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 SNX7Q9UNH6 387 aa-0.47□□□□□ -2.48
RNU6-346P-201ENST00000516288 RPAP1Q9BWH6 1393 aaPredicted RBP-0.47□□□□□ -2.49
RNU6-346P-201ENST00000516288 PDLIM1O00151 329 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 RANBP6O60518 1105 aaKnown RBP-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 PGK2P07205 417 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 CD55P08174 381 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 OR3A1P47881 315 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 UBE2AP49459 152 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 PITPNAQ00169 270 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 ACVR1Q04771 509 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 G3BP1Q13283 466 aaKnown RBP eCLIP-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 EIF2B1Q14232 305 aaKnown RBP-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 IHHQ14623 411 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 UNQ9370/PRO34162Q6UXP9 181 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 ZNF621Q6ZSS3 439 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 DEFB119Q8N690 84 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 NPBQ8NG41 125 aa-0.48□□□□□ -2.49
RNU6-346P-201ENST00000516288 SPATA18Q8TC71 538 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms