RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SLC6A14Q9UN76 642 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 DTX4Q9Y2E6 619 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 NTNG1Q9Y2I2 539 aa13.87□□□□□ -0.19
VCAN-211ENST00000513984 LY6G6EA0A0G2JKS1 128 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 TTC36A6NLP5 189 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 ENO4A6NNW6 628 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 H3BN98 237 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 M0R129 80 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 FMO6PO60774 539 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 GP2P55259 537 aaKnown RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 SNRPGP62308 76 aaKnown RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 NR0B2Q15466 257 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 YOD1Q5VVQ6 348 aaPredicted RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 NPSR1Q6W5P4 371 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 ZNF730Q6ZMV8 503 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 ZAR1Q86SH2 424 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 GPR135Q8IZ08 494 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 GNPDA2Q8TDQ7 276 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 ACOT11Q8WXI4 607 aaPredicted RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 COPS4Q9BT78 406 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 CNPPD1Q9BV87 410 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 NAA50Q9GZZ1 169 aaKnown RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 ARMC7Q9H6L4 198 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 C11orf16Q9NQ32 467 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 DHCR7Q9UBM7 475 aaKnown RBP13.86□□□□□ -0.19
VCAN-211ENST00000513984 ERVK-19Q9WJR5 959 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 U3KQA8 63 aa13.86□□□□□ -0.19
VCAN-211ENST00000513984 A8MU76 341 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 DSCR3O14972 297 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 YKT6O15498 198 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 INMTO95050 263 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CLPSP04118 112 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 OMPP47874 163 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 OR1D4P47884 311 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CSTF1Q05048 431 aaKnown RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 TSPAN31Q12999 210 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 DSG2Q14126 1118 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 HLA-BQ31612 363 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 FLYWCH1Q4VC44 716 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 TMEM201Q5SNT2 666 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 TMEM71Q6P5X7 295 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 QSOX2Q6ZRP7 698 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 PTCHD4Q6ZW05 846 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 NKAIN4Q8IVV8 208 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 ZNF615Q8N8J6 731 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 C16orf52Q8NHV5 167 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 TRUB1Q8WWH5 349 aaKnown RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 PIGKQ92643 395 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 RORBQ92753 470 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 GGHQ92820 318 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 EDAQ92838 391 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 MYDGFQ969H8 173 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 ZNF501Q96CX3 271 aaPredicted RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 NDC1Q9BTX1 674 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 OR10A5Q9H207 317 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CAPN10Q9HC96 672 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 ACOT13Q9NPJ3 140 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 TESQ9UGI8 421 aaKnown RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 ASCC3Q8N3C0 2202 aaKnown RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 IGKV3D-11A0A0A0MRZ8 115 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 NOL3O60936 208 aaKnown RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 IGKV1D-16P01601 117 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 IFNA16P05015 189 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CDK1P06493 297 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CT45A8P0DMV1 189 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CT45A9P0DMV2 189 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 ALAS2P22557 587 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 HTR2AP28223 471 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 MAP2K4P45985 399 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 PGDP52209 483 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 PLAURQ03405 335 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CT45A2Q5DJT8 189 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 SYT6Q5T7P8 510 aaPredicted RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 GUSBP11Q6P575 273 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 PRICKLE2Q7Z3G6 844 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 FAM181AQ8N9Y4 354 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 OR7G1Q8NGA0 311 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 OR4N2Q8NGD1 307 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 PIGXQ8TBF5 258 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 RAB2BQ8WUD1 216 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 PTCHD1Q96NR3 888 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 LIN28AQ9H9Z2 209 aaKnown RBP13.85□□□□□ -0.19
VCAN-211ENST00000513984 Q9N2J8 555 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 FGF21Q9NSA1 209 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 CLN6Q9NWW5 311 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 SERTAD3Q9UJW9 196 aa13.85□□□□□ -0.19
VCAN-211ENST00000513984 TRAPPC13A5PLN9 417 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 ATE1O95260 518 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 FADS2O95864 444 aaKnown RBP13.84□□□□□ -0.19
VCAN-211ENST00000513984 ANKRD34CP0C6C1 535 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 PRG2P13727 222 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 TNNI3P19429 210 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 DRD5P21918 477 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 NUDT6P53370 316 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 CDK5Q00535 292 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 TBCEQ15813 527 aaPredicted RBP13.84□□□□□ -0.19
VCAN-211ENST00000513984 PRAMEF17Q5VTA0 474 aa13.84□□□□□ -0.19
VCAN-211ENST00000513984 ZC3H14Q6PJT7 736 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms