RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 HEPHL1Q6MZM0 1159 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 APOOLQ6UXV4 268 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 THSD4Q6ZMP0 1018 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 NUP54Q7Z3B4 507 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 MARCH3Q86UD3 253 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 FITM2Q8N6M3 262 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 POGLUT1Q8NBL1 392 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 OR4C3Q8NH37 302 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 FBXO27Q8NI29 283 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 FAM110BQ8TC76 370 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 TSPEARQ8WU66 669 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 LRRC58Q96CX6 371 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 SNRNP40Q96DI7 357 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 SGCZQ96LD1 299 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 ANKRD27Q96NW4 1050 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 LRRC37BQ96QE4 947 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 CITED4Q96RK1 184 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 SDF2Q99470 211 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 TTTY12Q9BZ98 90 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 ASF1BQ9NVP2 202 aa8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.97□□□□□ -0.97
TOPBP1-209ENST00000513818 TTC36A6NLP5 189 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 OIP5O43482 229 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 ASNA1O43681 348 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 FADS1O60427 444 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 H6PDO95479 791 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 CELA3AP09093 270 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 RFPL3SP0C7P2 107 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 NR2F1P10589 423 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF24P17028 368 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 NAGAP17050 411 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 CNR1P21554 472 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 MST1P26927 711 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 MASP1P48740 699 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 HPCAP84074 193 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 FOXO1Q12778 655 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 CD226Q15762 336 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 ARHGAP11BQ3KRB8 267 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 GCNT6Q5T4J0 391 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 FNDC7Q5VTL7 733 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 TYW3Q6IPR3 259 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM180AQ6UWF9 173 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 FRRS1Q6ZNA5 592 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 DND1Q8IYX4 353 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 LSM14AQ8ND56 463 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 CHDHQ8NE62 594 aaPredicted RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 NFKBIDQ8NI38 313 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 RP9Q8TA86 221 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 TMCO6Q96DC7 493 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 TMEM19Q96HH6 336 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 SH3YL1Q96HL8 342 aaPredicted RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF597Q96LX8 424 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 KLHDC3Q9BQ90 382 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 FAM173AQ9BQD7 235 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF350Q9GZX5 532 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 MRGBPQ9NV56 204 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 EXD2Q9NVH0 621 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 CNIH4Q9P003 139 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 P2RX2Q9UBL9 471 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 KCNE5Q9UJ90 142 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 ANAPC2Q9UJX6 822 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 MRTO4Q9UKD2 239 aaKnown RBP8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 WDR45Q9Y484 360 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 WIF1Q9Y5W5 379 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 LIPGQ9Y5X9 500 aa8.96□□□□□ -0.98
TOPBP1-209ENST00000513818 NINQ8N4C6 2090 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 COL6A6A6NMZ7 2263 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 DUXAA6NLW8 204 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 CCT8L1PA6NM43 557 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 CLDN24A6NM45 220 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 B8ZZF3 427 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 NPIPA5E9PKD4 350 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 TFECO14948 347 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 SUV39H1O43463 412 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 KIAA0513O60268 411 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 BCAS1O75363 584 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 PEX14O75381 377 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 TRIM3O75382 744 aaPredicted RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ANGPTL1O95841 491 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 AQP1P29972 269 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 MAGEA5P43359 124 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ANXA11P50995 505 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 GAS1P54826 345 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 PSMD4P55036 377 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 PPIAP62937 165 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 RPP38P78345 283 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 CBX1P83916 185 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 HSF1Q00613 529 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ALDH6A1Q02252 535 aaKnown RBP8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 TLE1Q04724 770 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 MAPK14Q16539 360 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 CYP51A1Q16850 503 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 COQ5Q5HYK3 327 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 PDZK1Q5T2W1 519 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 NANOGP8Q6NSW7 305 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ZNF619Q8N2I2 560 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 TMEM251Q8N6I4 163 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ANKS4BQ8N8V4 417 aa8.95□□□□□ -0.98
TOPBP1-209ENST00000513818 ZFP62Q8NB50 900 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms