RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ZNF821O75541 412 aaPredicted RBP3.6□□□□□ -1.83
HTT-210ENST00000512909 RHOBTB1O94844 696 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 OAS1P00973 400 aaKnown RBP3.6□□□□□ -1.83
HTT-210ENST00000512909 PAEPP09466 180 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ADORA3P0DMS8 318 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 VCLP18206 1134 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 OXTRP30559 389 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 SRD5A2P31213 254 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 DUTP33316 252 aaKnown RBP3.6□□□□□ -1.83
HTT-210ENST00000512909 CAPGP40121 348 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 TNFRSF4P43489 277 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 NUMBP49757 651 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 KIAA1024LP59773 190 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 IRX4P78413 519 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 IRX1P78414 480 aaPredicted RBP3.6□□□□□ -1.83
HTT-210ENST00000512909 ADIGQ0VDE8 80 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 RPA4Q13156 261 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 NME3Q13232 169 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
HTT-210ENST00000512909 SYCP1Q15431 976 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 TRADDQ15628 312 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ZNF77Q15935 545 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 EXOC3L4Q17RC7 722 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ZNF528Q3MIS6 628 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ZCWPW2Q504Y3 356 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 RFTN2Q52LD8 501 aaPredicted RBP3.6□□□□□ -1.83
HTT-210ENST00000512909 EOGTQ5NDL2 527 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 TAF3Q5VWG9 929 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 TMEM64Q6YI46 380 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 SCD5Q86SK9 330 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 SLC43A2Q8N370 569 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 OR9Q2Q8NGE9 314 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 RLN3Q8WXF3 142 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 KRT35Q92764 455 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 GGHQ92820 318 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 SLC35C1Q96A29 364 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 TUBGCP2Q9BSJ2 902 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ACAT2Q9BWD1 397 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 UBXN6Q9BZV1 441 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 WWTR1Q9GZV5 400 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 C5orf66Q9H5L9 145 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 CSNK1G1Q9HCP0 422 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ABCC13Q9NSE7 274 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 SAMSN1Q9NSI8 373 aaKnown RBP3.6□□□□□ -1.83
HTT-210ENST00000512909 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.6□□□□□ -1.83
HTT-210ENST00000512909 ZNF319Q9P2F9 582 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 PLA2G4CQ9UP65 541 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 KCNK6Q9Y257 313 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 MOB4Q9Y3A3 225 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ETV7Q9Y603 341 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 PLXNA3P51805 1871 aa3.6□□□□□ -1.83
HTT-210ENST00000512909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 FAM47DPA6NHR8 397 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 SHISA7A6NL88 538 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 YJEFN3A6XGL0 299 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 WASH3PC4AMC7 463 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 E7ENQ6 273 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 GOLGA8SH3BPF8 625 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 K7EQS6 105 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 XPO1O14980 1071 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 CHUKO15111 745 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 TBL1XO60907 577 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 CEACAM4O75871 244 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 GOSR1O95249 250 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 DUS4LO95620 317 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 APBB3O95704 486 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 SKILP12757 684 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 CD59P13987 128 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 POLR2EP19388 210 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 OPRD1P41143 372 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ACADSBP45954 432 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 SMSP52788 366 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ATXN3P54252 364 aaPredicted RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 CSNK2BP67870 215 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 MS4A2Q01362 244 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ENPEPQ07075 957 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 INCA1Q0VD86 236 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 NPRL3Q12980 569 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 CBX3Q13185 183 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ZNF177Q13360 481 aaPredicted RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 KRT31Q15323 416 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 SF3A2Q15428 464 aaKnown RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 MS4A18Q3C1V0 323 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 MOGAT2Q3SYC2 334 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 MPPE1Q53F39 396 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ZNF776Q68DI1 518 aaPredicted RBP3.59□□□□□ -1.83
HTT-210ENST00000512909 FAAP20Q6NZ36 180 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 PMF1Q6P1K2 205 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 RFWD3Q6PCD5 774 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 FRRS1Q6ZNA5 592 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 Q6ZVQ6 151 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 LPCAT2Q7L5N7 544 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 SLC22A15Q8IZD6 547 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 AMER3Q8N944 861 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 CCDC197Q8NCU1 140 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 OR10G7Q8NGN6 311 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 MGARPQ8TDB4 240 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 ZNF606Q8WXB4 792 aa3.59□□□□□ -1.83
HTT-210ENST00000512909 PTP4A1Q93096 173 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms