RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 A0A1W2PRB8 838 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 OR6C70A6NIJ9 312 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 E9PBE3 544 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 M0R082 166 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 RNASET2O00584 256 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 TFECO14948 347 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ASNA1O43681 348 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 DYRK3O43781 588 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC19A2O60779 497 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 DIAPH2O60879 1101 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 COQ9O75208 318 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 VPS4BO75351 444 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PDE9AO76083 593 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SLITRK5O94991 958 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 HTR3BO95264 441 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 IL33O95760 270 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 HMGN2P05204 90 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PRPS1L1P21108 318 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 CNR1P21554 472 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 MPIP34949 423 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 CA7P43166 264 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 MRPL19P49406 292 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 B3GALT5-AS1P59052 145 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PPIAP62937 165 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 MRPS22P82650 360 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 NDUFAF6Q330K2 333 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM174BQ3ZCQ3 159 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 EIPR1Q53HC9 387 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SAXO2Q658L1 398 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PLXDC2Q6UX71 529 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ANGPTL8Q6UXH0 198 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 GFRALQ6UXV0 394 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SPATC1Q76KD6 591 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SAMD14Q8IZD0 417 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM109AQ8N4B1 249 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 FADS6Q8N9I5 356 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 OR8J2Q8NGG1 315 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF417Q8TAU3 575 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SFXN5Q8TD22 340 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 LRRC8CQ8TDW0 803 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 DIO2Q92813 273 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 HSPBAP1Q96EW2 488 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ZBED6CLQ96FA7 236 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 RMND5BQ96G75 393 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 AURKBQ96GD4 344 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 CCDC120Q96HB5 630 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 TMEM41AQ96HV5 264 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SGCZQ96LD1 299 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF597Q96LX8 424 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 MAGEB18Q96M61 343 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 CCDC115Q96NT0 180 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ZNF587Q96SQ5 575 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 G6PC3Q9BUM1 346 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 DEFB127Q9H1M4 99 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 IKZF5Q9H5V7 419 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 IL1RL2Q9HB29 575 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ZFP64Q9NPA5 681 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PNPLA3Q9NST1 481 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 ZCCHC3Q9NUD5 404 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 INTS9Q9NV88 658 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PRODH2Q9UF12 536 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PSME2Q9UL46 239 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 VPS4AQ9UN37 437 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 MAPRE3Q9UPY8 281 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 EIF3LQ9Y262 564 aaKnown RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 WIF1Q9Y5W5 379 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 FREM3P0C091 2139 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 NINQ8N4C6 2090 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 HRNRQ86YZ3 2850 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 B2RBV5 119 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 EMC8O43402 210 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SCO2O43819 266 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 ZG16O60844 167 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 ADAM11O75078 769 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 KCNK2O95069 426 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SNUPNO95149 360 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 CRYABP02511 175 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 P04436 131 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 HPNP05981 417 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 GSNP06396 782 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 NAGAP17050 411 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TCEA1P23193 301 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 EVI2BP34910 448 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SOAT1P35610 550 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 KIR3DL1P43629 444 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 MASP1P48740 699 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TRPC1P48995 793 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 PRKAG1P54619 331 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 AQP5P55064 265 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 KCNJ2P63252 427 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 GUCY1A3Q02108 690 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 CRYZQ08257 329 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 SF3A3Q12874 501 aaKnown RBP eCLIP6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TP53BP2Q13625 1128 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 PGS1Q32NB8 556 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TIGD2Q4W5G0 525 aa6.55□□□□□ -1.36
TOPBP1-207ENST00000509162 TMEM201Q5SNT2 666 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms